RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 C9orf50Q5SZB4 431 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 ZBED8Q8IZ13 594 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 TMEM199Q8N511 208 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 SNX27Q96L92 541 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 KREMEN1Q96MU8 473 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 LPIN3Q9BQK8 851 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 EBF3Q9H4W6 596 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 STX18Q9P2W9 335 aaKnown RBP10.65□□□□□ -0.7
TUBB-208ENST00000396389 PPM1HQ9ULR3 514 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 NEU2Q9Y3R4 380 aa10.65□□□□□ -0.7
TUBB-208ENST00000396389 FAM237BA0A1B0GVD1 139 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 B2RBV5 119 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 C9IYK1 514 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 H3BRJ5 948 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 TCEA3O75764 348 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 B3GAT3O94766 335 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 LMNAP02545 664 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 TNNC2P02585 160 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 ENO1P06733 434 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 SSTR1P30872 391 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 CA8P35219 290 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 OR1G1P47890 313 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 FAM26DQ5JW98 314 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 ZFYVE27Q5T4F4 411 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 SYCP2LQ5T4T6 812 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 C12orf56Q8IXR9 622 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 C12orf50Q8NA57 414 aaPredicted RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 TCP10LQ8TDR4 215 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 CPA5Q8WXQ8 436 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 AZIN2Q96A70 460 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 ACSF2Q96CM8 615 aaPredicted RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 ANKRD36BP1Q96IX9 119 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 TMEM120AQ9BXJ8 343 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 APOBEC3GQ9HC16 384 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 RAB20Q9NX57 234 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 SIX4Q9UIU6 781 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 ZNF232Q9UNY5 417 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 SNX9Q9Y5X1 595 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 TYROBPO43914 113 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 SORBS2O94875 1100 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 KRT5P13647 590 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 CLUL1Q15846 466 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 SEPT7Q16181 437 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 PABPC1LQ4VXU2 614 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 LIN52Q52LA3 116 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 GLB1LQ6UWU2 654 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 SATL1Q86VE3 508 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 C3orf58Q8NDZ4 430 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 HIPK4Q8NE63 616 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 FBXL13Q8NEE6 735 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 CFAP61Q8NHU2 1237 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 PHF12Q96QT6 1004 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 NMUR2Q9GZQ4 415 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 KCNK13Q9HB14 408 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 NOCTQ9UK39 431 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 E5RJQ4 531 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 DDHD2O94830 711 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 PGM3O95394 542 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 KITP10721 976 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 ARFIP2P53365 341 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 HADHBP55084 474 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 BPIFB4P59827 614 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 FPGSQ05932 587 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 PDIA2Q13087 525 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 DYNC1I2Q13409 638 aaKnown RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 DSC3Q14574 896 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 FYB2Q5VWT5 728 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 RAPH1Q70E73 1250 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 TMEM173Q86WV6 379 aaPredicted RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 CGRRF1Q99675 332 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 THTPAQ9BU02 230 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 TSPYL2Q9H2G4 693 aaPredicted RBP10.64□□□□□ -0.71
TUBB-208ENST00000396389 TMEM8AQ9HCN3 771 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 RGS18Q9NS28 235 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 CHMP2BQ9UQN3 213 aa10.64□□□□□ -0.71
TUBB-208ENST00000396389 SPTLC1O15269 473 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 IFNB1P01574 187 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 C4BPAP04003 597 aaKnown RBP10.63□□□□□ -0.71
TUBB-208ENST00000396389 THP07101 528 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 ANPEPP15144 967 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 AXLP30530 894 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 BRCC3P46736 316 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 ARL4CP56559 192 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 ZNF699Q32M78 642 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 LPCAT4Q643R3 524 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 TREML1Q86YW5 311 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 TTC17Q96AE7 1141 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 SMYD3Q9H7B4 428 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 ZWILCHQ9H900 591 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 MARCOQ9UEW3 520 aaPredicted RBP10.63□□□□□ -0.71
TUBB-208ENST00000396389 ATP8B3O60423 1300 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 PDGFRBP09619 1106 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 TROVE2P10155 538 aaKnown RBP eCLIP10.63□□□□□ -0.71
TUBB-208ENST00000396389 MYL2P10916 166 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 TCF4P15884 667 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 MAGEA10P43363 369 aaPredicted RBP10.63□□□□□ -0.71
TUBB-208ENST00000396389 TAS2R40P59535 323 aa10.63□□□□□ -0.71
TUBB-208ENST00000396389 CETN1Q12798 172 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms