RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 OR10T2Q8NGX3 314 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 GDAP1Q8TB36 358 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 HTR3CQ8WXA8 447 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 CABS1Q96KC9 395 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 SPATA13Q96N96 652 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 FERMT1Q9BQL6 677 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 TSEN34Q9BSV6 310 aaKnown RBP15.46■□□□□ 0.06
CBX3-202ENST00000396386 CFHR5Q9BXR6 569 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 WDR6Q9NNW5 1121 aaKnown RBP15.46■□□□□ 0.06
CBX3-202ENST00000396386 MLXIPLQ9NP71 852 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 PNPLA8Q9NP80 782 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 RGS18Q9NS28 235 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 DDIT4Q9NX09 232 aa15.46■□□□□ 0.06
CBX3-202ENST00000396386 PPP1R12AO14974 1030 aaPredicted RBP15.45■□□□□ 0.06
CBX3-202ENST00000396386 ZNF189O75820 626 aaPredicted RBP15.45■□□□□ 0.06
CBX3-202ENST00000396386 METTL18O95568 372 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 F9P00740 461 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 BDNFP23560 247 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 ADRA1BP35368 520 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 FDFT1P37268 417 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 MSH2P43246 934 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 SLC18A1P54219 525 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 SEMA5AQ13591 1074 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 PDK1Q15118 436 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 ARL13BQ3SXY8 428 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 C6orf89Q6UWU4 347 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 SCML4Q8N228 414 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 CCDC197Q8NCU1 140 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 ADAM32Q8TC27 787 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 LRRC39Q96DD0 335 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 CFAP36Q96G28 342 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 TRIM62Q9BVG3 475 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 PCDHB8Q9UN66 801 aa15.45■□□□□ 0.06
CBX3-202ENST00000396386 TCRBV9S1A1TA0A576 114 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 ANKRD65E5RJM6 399 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 DCLK1O15075 740 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 SPAG7O75391 227 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 TPI1P60174 286 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 IL9RQ01113 521 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 IFT88Q13099 833 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 TRAF7Q6Q0C0 670 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 CTU1Q7Z7A3 348 aaKnown RBP15.44■□□□□ 0.06
CBX3-202ENST00000396386 CAND1Q86VP6 1230 aaKnown RBP15.44■□□□□ 0.06
CBX3-202ENST00000396386 OTUD6BQ8N6M0 293 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 URGCPQ8TCY9 931 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 PXYLP1Q8TE99 480 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 DCAKDQ8WVC6 231 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 MAGEB18Q96M61 343 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 TRPV6Q9H1D0 765 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 KIF9Q9HAQ2 790 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 XAB2Q9HCS7 855 aaKnown RBP15.44■□□□□ 0.06
CBX3-202ENST00000396386 SSU72Q9NP77 194 aaKnown RBP15.44■□□□□ 0.06
CBX3-202ENST00000396386 TMLHEQ9NVH6 421 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 FBXW11Q9UKB1 542 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 GOLGA6L7A0A1B0GV03 622 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 TCP11X1B4DZS4 312 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 RNF103O00237 685 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 OPHN1O60890 802 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 AVILO75366 819 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 EOMESO95936 686 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 CPP00450 1065 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 ITGB1P05556 798 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 GSTA2P09210 222 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 MAGEA3P43357 314 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 GLUD2P49448 558 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 ZNF135P52742 658 aaPredicted RBP15.44■□□□□ 0.06
CBX3-202ENST00000396386 SEMA3BQ13214 749 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 ANKRD20A2Q5SQ80 823 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 FAM182AQ5T1J6 154 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 ANKRD20A1Q5TYW2 823 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 ANKRD20A3Q5VUR7 823 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 PM20D1Q6GTS8 502 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 DENND5BQ6ZUT9 1274 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 PDZD4Q76G19 769 aaPredicted RBP15.44■□□□□ 0.06
CBX3-202ENST00000396386 C4orf33Q8N1A6 199 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 AGGF1Q8N302 714 aaeCLIP15.44■□□□□ 0.06
CBX3-202ENST00000396386 ANKS4BQ8N8V4 417 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
CBX3-202ENST00000396386 TMEM209Q96SK2 561 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 LGMNQ99538 433 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.44■□□□□ 0.062e-20■■■■■ 40.5
CBX3-202ENST00000396386 ZC3H7BQ9UGR2 993 aaKnown RBP15.44■□□□□ 0.06
CBX3-202ENST00000396386 TTLL3Q9Y4R7 772 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 RAD54BQ9Y620 910 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 IKBKGQ9Y6K9 419 aa15.44■□□□□ 0.06
CBX3-202ENST00000396386 A0A1W2PQ45 241 aaPredicted RBP15.43■□□□□ 0.06
CBX3-202ENST00000396386 A0A1W2PQY0 241 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 GBP2P32456 591 aaPredicted RBP15.43■□□□□ 0.06
CBX3-202ENST00000396386 AP1B1Q10567 949 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 ITIH4Q14624 930 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 DEFB115Q30KQ5 88 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 RNF187Q5TA31 235 aaPredicted RBP15.43■□□□□ 0.06
CBX3-202ENST00000396386 C4orf50Q6ZRC1 276 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 SLC24A5Q71RS6 500 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 ZNF534Q76KX8 674 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 PIGWQ7Z7B1 504 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 LINC01599Q8WXQ3 324 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 EDEM1Q92611 657 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
CBX3-202ENST00000396386 PLXNA3P51805 1871 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms