RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ADGRF1Q5T601 910 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 UNQ6494/PRO21346Q6UXR6 183 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 FMR1NBQ8N0W7 255 aaPredicted RBP17.09■□□□□ 0.33
DDR1-229ENST00000396342 UBA3Q8TBC4 463 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 KCTD13Q8WZ19 329 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 IRGQQ8WZA9 623 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 EDEM1Q92611 657 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 GPR174Q9BXC1 333 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 ADAM33Q9BZ11 813 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 IRX2Q9BZI1 471 aaPredicted RBP17.09■□□□□ 0.33
DDR1-229ENST00000396342 ITM2CQ9NQX7 267 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 NFE2L3Q9Y4A8 694 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 PTPRDP23468 1912 aa17.09■□□□□ 0.33
DDR1-229ENST00000396342 WASH3PC4AMC7 463 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 P4HA2O15460 535 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 IRAK2O43187 625 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 RNASEH1O60930 286 aaKnown RBP17.08■□□□□ 0.32
DDR1-229ENST00000396342 CHRM1P11229 460 aaPredicted RBP17.08■□□□□ 0.32
DDR1-229ENST00000396342 POLR2EP19388 210 aaKnown RBP17.08■□□□□ 0.32
DDR1-229ENST00000396342 FMO5P49326 533 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 MCCD1P59942 119 aaPredicted RBP17.08■□□□□ 0.32
DDR1-229ENST00000396342 ZNF234Q14588 700 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 TEAD4Q15561 434 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 TRIP4Q15650 581 aaPredicted RBP17.08■□□□□ 0.32
DDR1-229ENST00000396342 GEN1Q17RS7 908 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 TTC31Q49AM3 519 aaPredicted RBP17.08■□□□□ 0.32
DDR1-229ENST00000396342 LRSAM1Q6UWE0 723 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 AHI1Q8N157 1196 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 ENGASEQ8NFI3 743 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 SNX19Q92543 992 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 PCED1AQ9H1Q7 454 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 CAPN10Q9HC96 672 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 SUN2Q9UH99 717 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 NCKAP1Q9Y2A7 1128 aa17.08■□□□□ 0.32
DDR1-229ENST00000396342 CNOT1A5YKK6 2376 aaKnown RBP17.07■□□□□ 0.32
DDR1-229ENST00000396342 M0QYV0 167 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 CAPN9O14815 690 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 MOCS3O95396 460 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 CER1O95813 267 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 DNTTP04053 509 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 IL12RB1P42701 662 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 SEMA3BQ13214 749 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 SUZ12Q15022 739 aaKnown RBP17.07■□□□□ 0.32
DDR1-229ENST00000396342 CNGA2Q16280 664 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 LCLAT1Q6UWP7 414 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 SCML4Q8N228 414 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 GANCQ8TET4 914 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 PIWIL1Q96J94 861 aaKnown RBP17.07■□□□□ 0.32
DDR1-229ENST00000396342 LHX5Q9H2C1 402 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 SFMBT1Q9UHJ3 866 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 CEP83Q9Y592 693 aa17.07■□□□□ 0.32
DDR1-229ENST00000396342 EPG5Q9HCE0 2579 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 DNAH14Q0VDD8 3507 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 CACNA1BQ00975 2339 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 O00370 1275 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 MED7O43513 233 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 ACADSBP45954 432 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 TPMTP51580 245 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 TBX4P57082 545 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 ZBTB16Q05516 673 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 CHST9Q7L1S5 443 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 SLC41A1Q8IVJ1 513 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 OR2T3Q8NH03 318 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 SLC35C1Q96A29 364 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 SKA1Q96BD8 255 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 HSFY1Q96LI6 401 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 FAM81BQ96LP2 452 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 SCNM1Q9BWG6 230 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 SLC6A17Q9H1V8 727 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 ST7Q9NRC1 585 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 ABCB8Q9NUT2 735 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 DNAAF2Q9NVR5 837 aaKnown RBP17.06■□□□□ 0.32
DDR1-229ENST00000396342 WSB2Q9NYS7 404 aaPredicted RBP17.06■□□□□ 0.32
DDR1-229ENST00000396342 SLC12A6Q9UHW9 1150 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 GGA2Q9UJY4 613 aa17.06■□□□□ 0.32
DDR1-229ENST00000396342 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
DDR1-229ENST00000396342 YJEFN3A6XGL0 299 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 E7ENQ6 273 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 BCAT2O15382 392 aaPredicted RBP17.05■□□□□ 0.32
DDR1-229ENST00000396342 LTFP02788 710 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 PABPC1P11940 636 aaKnown RBP17.05■□□□□ 0.32
DDR1-229ENST00000396342 KRT5P13647 590 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 RGS7P49802 495 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 DAOAP59103 153 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 MPP7Q5T2T1 576 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 DCAF12L1Q5VU92 463 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 RNF219Q5W0B1 726 aaPredicted RBP17.05■□□□□ 0.32
DDR1-229ENST00000396342 FAM124AQ86V42 546 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 CACUL1Q86Y37 369 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 HJURPQ8NCD3 748 aaPredicted RBP17.05■□□□□ 0.32
DDR1-229ENST00000396342 SETD7Q8WTS6 366 aaKnown RBP17.05■□□□□ 0.32
DDR1-229ENST00000396342 FAM149B1Q96BN6 582 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 SERPINB11Q96P15 392 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 MKRN2Q9H000 416 aaKnown RBP17.05■□□□□ 0.32
DDR1-229ENST00000396342 USP36Q9P275 1121 aaKnown RBP17.05■□□□□ 0.32
DDR1-229ENST00000396342 HCN2Q9UL51 889 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 NEUROG3Q9Y4Z2 214 aa17.05■□□□□ 0.32
DDR1-229ENST00000396342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms