RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 DDX20Q9UHI6 824 aaKnown RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ABHD14A-ACY1A0A1B0GW23 586 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 KRT4P19013 534 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 IRX1P78414 480 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TWF1Q12792 350 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PTPN21Q16825 1174 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 RALGPS1Q5JS13 557 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 USP6NLQ92738 828 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 KAT2BQ92831 832 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 KREMEN1Q96MU8 473 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ACSS3Q9H6R3 686 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 NMRK1Q9NWW6 199 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 VANGL2Q9ULK5 521 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 DOCK4Q8N1I0 1966 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 CCDC189A1A4V9 331 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 SYCE1LA8MT33 242 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF197O14709 1029 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 KLHL2O95198 593 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 NFICP08651 508 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TKTP29401 623 aaKnown RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 L1CAMP32004 1257 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 IRAK1P51617 712 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 GEMP55040 296 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PTPROQ16827 1216 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 SPOCD1Q6ZMY3 1216 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 C15orf39Q6ZRI6 1047 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 OR5B17Q8NGF7 314 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 RIN3Q8TB24 985 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PIK3R5Q8WYR1 880 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ZYG11BQ9C0D3 744 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PDGFDQ9GZP0 370 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 NRDE2Q9H7Z3 1164 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 STK38LQ9Y2H1 464 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 C5orf60A6NFR6 353 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 GLRA3O75311 464 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TMCC1O94876 653 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 SERPINB5P36952 375 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 GP5P40197 560 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 MLH1P40692 756 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PLA2G4AP47712 749 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF177Q13360 481 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 BTG3Q14201 252 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 KYNUQ16719 465 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PARP15Q460N3 678 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 RELL1Q8IUW5 271 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 MPP5Q8N3R9 675 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PPM1NQ8N819 430 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TTC17Q96AE7 1141 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TGS1Q96RS0 853 aaKnown RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 CCT7Q99832 543 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TTPALQ9BTX7 342 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 HSFX1Q9UBD0 423 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PADI3Q9ULW8 664 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 USP15Q9Y4E8 981 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 DPYSL4O14531 572 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PFKLP17858 780 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ACLYP53396 1101 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CDH18Q13634 790 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PPP2R5DQ14738 602 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PARP6Q2NL67 630 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MCRS1Q96EZ8 462 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MAGEB10Q96LZ2 347 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 FIZ1Q96SL8 496 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TRIM56Q9BRZ2 755 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PDZD7Q9H5P4 517 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MARCH2Q9P0N8 246 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CHUKO15111 745 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TRUB2O95900 331 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TFRCP02786 760 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SMPD1P17405 629 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CYP2F1P24903 491 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CDC25CP30307 473 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HOXD13P35453 343 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HCAR3P49019 387 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SULT2A1Q06520 285 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RING1Q06587 406 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 DNAL1Q4LDG9 190 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 FAM171A1Q5VUB5 890 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TPGS2Q68CL5 300 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 SERINC5Q86VE9 423 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PRELID2Q8N945 189 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 HEXDCQ8WVB3 486 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RPRD1AQ96P16 312 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ZCCHC2Q9C0B9 1178 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 CDH19Q9H159 772 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ADAM28Q9UKQ2 775 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 BAG5Q9UL15 447 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MAPRE3Q9UPY8 281 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 MTO1Q9Y2Z2 717 aaKnown RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 PKP3Q9Y446 797 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 IPPQ9Y573 584 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TRIM17Q9Y577 477 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 AKAP6Q13023 2319 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM120BA0PK00 339 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ANKRD63C9JTQ0 380 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 RGS20O76081 388 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 ESRRAP11474 423 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-203ENST00000395896 OR1E1P30953 314 aa3.48□□□□□ -1.85
VPS13C-203ENST00000395896 IFNAR2P48551 515 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms