RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 TCRBV5S1A1TA0A578 114 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 ANTXRLA6NF34 631 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 TRIM24O15164 1050 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 NCAM2O15394 837 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 ACSL4O60488 711 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 MFAP3LO75121 409 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 MOCS2O96007 188 aaPredicted RBP17.2■□□□□ 0.34
CXCL1-201ENST00000395761 FTLP02792 175 aaPredicted RBP17.2■□□□□ 0.34
CXCL1-201ENST00000395761 GZMAP12544 262 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 TYRP14679 529 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 RRM1P23921 792 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 SLC6A4P31645 630 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 GBP1P32455 592 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 CHKAP35790 457 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 SULT1E1P49888 294 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 ADKP55263 362 aaKnown RBP17.2■□□□□ 0.34
CXCL1-201ENST00000395761 GRSF1Q12849 480 aaKnown RBP eCLIP17.2■□□□□ 0.34
CXCL1-201ENST00000395761 NME3Q13232 169 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 CCINQ13939 588 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 FAM133BQ5BKY9 247 aaKnown RBP17.2■□□□□ 0.34
CXCL1-201ENST00000395761 ADGRF1Q5T601 910 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 FYB2Q5VWT5 728 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 SFTPA1Q8IWL2 248 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 ETFBKMTQ8IXQ9 262 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 CPXM2Q8N436 756 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 TC2NQ8N9U0 490 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 AZIN2Q96A70 460 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 CFAP57Q96MR6 1250 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 PPP1R9BQ96SB3 815 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 TBCBQ99426 244 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 DNAJC7Q99615 494 aa17.2■□□□□ 0.34
CXCL1-201ENST00000395761 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.2■□□□□ 0.34
CXCL1-201ENST00000395761 KMT2EQ8IZD2 1858 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 KCNU1A8MYU2 1149 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 GOLGA6L6A8MZA4 724 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 GFRA2O00451 464 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 TULP3O75386 442 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 LATS1O95835 1130 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 KRT3P12035 628 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 SLC11A2P49281 568 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 SGSHP51688 502 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 ATXN1P54253 815 aaKnown RBP17.19■□□□□ 0.34
CXCL1-201ENST00000395761 GSCP56915 257 aaPredicted RBP17.19■□□□□ 0.34
CXCL1-201ENST00000395761 GSDMDP57764 484 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 KDSRQ06136 332 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 GAS6Q14393 721 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 SLC25A52Q3SY17 297 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 RAB6CQ53S08 254 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 DGKKQ5KSL6 1271 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 RFWD3Q6PCD5 774 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 ARCQ7LC44 396 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 DTWD2Q8NBA8 298 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 SPC24Q8NBT2 197 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 C3orf20Q8ND61 904 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 RXFP2Q8WXD0 754 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 RNF34Q969K3 372 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 MYEOVQ96EZ4 313 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 PNKPQ96T60 521 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 RAB6CQ9H0N0 254 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 PIGVQ9NUD9 493 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.19■□□□□ 0.34
CXCL1-201ENST00000395761 RRN3Q9NYV6 651 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 RAPGEFL1Q9UHV5 662 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 CLEC4EQ9ULY5 219 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 STAP1Q9ULZ2 295 aa17.19■□□□□ 0.34
CXCL1-201ENST00000395761 A0A087X0T9 212 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 C2CD4BA6NLJ0 364 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 SIGLEC16A6NMB1 481 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 ATMINO43313 823 aaPredicted RBP17.18■□□□□ 0.34
CXCL1-201ENST00000395761 CACNG3O60359 315 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 RTN2O75298 545 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 PENKP01210 267 aaPredicted RBP17.18■□□□□ 0.34
CXCL1-201ENST00000395761 APOEP02649 317 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 FAM228BP0C875 321 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 CCR1P32246 355 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 RFC1P35251 1148 aaPredicted RBP17.18■□□□□ 0.34
CXCL1-201ENST00000395761 EIF4A3P38919 411 aaKnown RBP17.18■□□□□ 0.34
CXCL1-201ENST00000395761 EIF2DP41214 584 aaKnown RBP17.18■□□□□ 0.34
CXCL1-201ENST00000395761 RPS9P46781 194 aaKnown RBP17.18■□□□□ 0.34
CXCL1-201ENST00000395761 CCDC173Q0VFZ6 552 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 CCDC14Q49A88 953 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 SH3PXD2AQ5TCZ1 1133 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 Q6ZS52 159 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 BNIPLQ7Z465 357 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 PHTF2Q8N3S3 785 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 DDI1Q8WTU0 396 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 VCPIP1Q96JH7 1222 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 PANX2Q96RD6 677 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 SELENOOQ9BVL4 669 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 ANLNQ9NQW6 1124 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 ABHD10Q9NUJ1 306 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 DEC1Q9P2X7 70 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 ZNF318Q5VUA4 2279 aa17.18■□□□□ 0.34
CXCL1-201ENST00000395761 I6L893 689 aaPredicted RBP17.17■□□□□ 0.34
CXCL1-201ENST00000395761 K7EQS6 105 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 KAT7O95251 611 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 CISD3P0C7P0 127 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 PDGFRAP16234 1089 aa17.17■□□□□ 0.34
CXCL1-201ENST00000395761 DRD1P21728 446 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms