RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 KPNA7A9QM74 516 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 PSTPIP1O43586 416 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 CNMDO75829 334 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 ASS1P00966 412 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 ITIH2P19823 946 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 SERPINB1P30740 379 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 HOXD13P35453 343 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 MAGEA10P43363 369 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 OCRLQ01968 901 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 MBTD1Q05BQ5 628 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 ART3Q13508 389 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 LPIN1Q14693 890 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 PDK3Q15120 406 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 BOLA3Q53S33 107 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 EMC10Q5UCC4 262 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 IZUMO3Q5VZ72 239 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 HGSNATQ68CP4 663 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 C4orf50Q6ZRC1 276 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 GPR141Q7Z602 305 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 EXOC3L1Q86VI1 746 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 ECHDC2Q86YB7 292 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 SLC13A5Q86YT5 568 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 PDIK1LQ8N165 341 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 OR6Y1Q8NGX8 325 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 GDPD5Q8WTR4 605 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 AVENQ9NQS1 362 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 PRDM5Q9NQX1 630 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 KLHL11Q9NVR0 708 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 KANSL3Q9P2N6 904 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 DSEQ9UL01 958 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 TMED5Q9Y3A6 229 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 Q9Y3F1 56 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 MAD1L1Q9Y6D9 718 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 DDX60LQ5H9U9 1706 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 SEPT4O43236 478 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 TREHO43280 583 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 NDUFB5O43674 189 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 DDHD2O94830 711 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 SNAI1O95863 264 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 PIGRP01833 764 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 HMGCRP04035 888 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 FAM58BPP0C7Q3 252 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 SRGAP2BP0DMP2 458 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 ANPEPP15144 967 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 SULT1E1P49888 294 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 BCAT1P54687 386 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 HDAC4P56524 1084 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 ZNF200P98182 395 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 CCL14Q16627 93 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 RWDD4Q6NW29 188 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 TMEM53Q6P2H8 277 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 B3GNT9Q6UX72 402 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 TMPRSS6Q8IU80 811 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 DQX1Q8TE96 717 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 TSPAN18Q96SJ8 248 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 RBM15Q96T37 977 aaKnown RBP eCLIP5.86□□□□□ -1.47
RFFL-202ENST00000394597 KLF6Q99612 283 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 BRD8Q9H0E9 1235 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 NRDE2Q9H7Z3 1164 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 CYLDQ9NQC7 956 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 SCHIP1Q9P0W5 487 aaPredicted RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 STX18Q9P2W9 335 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 CPSF3Q9UKF6 684 aaKnown RBP5.86□□□□□ -1.47
RFFL-202ENST00000394597 AK5Q9Y6K8 562 aa5.86□□□□□ -1.47
RFFL-202ENST00000394597 RBAK-RBAKDNI3L0D1 243 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 APOL1O14791 398 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 PMM2O15305 246 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 HOXA2O43364 376 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 DEAF1O75398 565 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 ASLP04424 464 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 NUDT17P0C025 328 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ELNP15502 786 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 KRT4P19013 534 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 PPARGP37231 505 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 TUBP50607 506 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CLCN2P51788 898 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 OTUD4Q01804 1114 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 PPP2R5DQ14738 602 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TMEM63BQ5T3F8 832 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SATL1Q86VE3 508 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ZBED8Q8IZ13 594 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 BBS5Q8N3I7 341 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SH3TC2Q8TF17 1288 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 FAF2Q96CS3 445 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ARHGEF26Q96DR7 871 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 VPS50Q96JG6 964 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 KREMEN1Q96MU8 473 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ZNF317Q96PQ6 595 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 TUBGCP5Q96RT8 1024 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SH3GL1Q99961 368 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ADAM2Q99965 735 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 MANSC1Q9H8J5 431 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 RSAD1Q9HA92 442 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ACP6Q9NPH0 428 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TAS2R14Q9NYV8 317 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ST3GAL5Q9UNP4 418 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 NAALADL1Q9UQQ1 740 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 PRG3Q9Y2Y8 225 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 HES2Q9Y543 173 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 GPC6Q9Y625 555 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms