RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ARHGAP15Q53QZ3 475 aa9.37□□□□□ -0.91
CDH11-202ENST00000394156 ELMSAN1Q6PJG2 1045 aa9.37□□□□□ -0.91
CDH11-202ENST00000394156 CLEC4DQ8WXI8 215 aa9.37□□□□□ -0.91
CDH11-202ENST00000394156 MRPS31Q92665 395 aaKnown RBP9.37□□□□□ -0.91
CDH11-202ENST00000394156 HIST1H2AHQ96KK5 128 aa9.37□□□□□ -0.91
CDH11-202ENST00000394156 PCDHB18PQ96TA0 734 aa9.37□□□□□ -0.91
CDH11-202ENST00000394156 HIST1H2AJQ99878 128 aa9.37□□□□□ -0.91
CDH11-202ENST00000394156 H2AFJQ9BTM1 129 aa9.37□□□□□ -0.91
CDH11-202ENST00000394156 TMBIM4Q9HC24 238 aa9.37□□□□□ -0.91
CDH11-202ENST00000394156 TRMT6Q9UJA5 497 aaKnown RBP9.37□□□□□ -0.91
CDH11-202ENST00000394156 CCNT2O60583 730 aaKnown RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 SERPINI2O75830 405 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 FKBP9O95302 570 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 SMPD1P17405 629 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 LMO2P25791 158 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 NFKBIAP25963 317 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 KPNA1P52294 538 aaPredicted RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 CENPCQ03188 943 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 CDC16Q13042 620 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 FKBP9P1Q75LS8 142 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 POLNQ7Z5Q5 900 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 B3GALNT2Q8NCR0 500 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 FAM162AQ96A26 154 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 SMARCD1Q96GM5 515 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 TRIM54Q9BYV2 358 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 GANQ9H2C0 597 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 ACTR5Q9H9F9 607 aaPredicted RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 P4HA2O15460 535 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 SPRP35270 261 aaPredicted RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 ALDH9A1P49189 494 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 AP2B1P63010 937 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 FAAP100Q0VG06 881 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 AP5B1Q2VPB7 878 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 ILDR2Q71H61 639 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 LDB1Q86U70 411 aaPredicted RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 B4GALNT2Q8NHY0 566 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 KREMEN1Q96MU8 473 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 L2HGDHQ9H9P8 463 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 VTA1Q9NP79 307 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 FBXO6Q9NRD1 293 aaPredicted RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 RGPD1P0DJD0 1748 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 CCL22O00626 93 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 NRLP54845 237 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 AQP5P55064 265 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 PRKCZQ05513 592 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 PAPD7Q5XG87 772 aaKnown RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 LRRC55Q6ZSA7 311 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 GLT6D1Q7Z4J2 308 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 ZNF614Q8N883 585 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 ZSCAN18Q8TBC5 510 aaPredicted RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 PIK3R5Q8WYR1 880 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 TNFRSF25Q93038 417 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 KLHL5Q96PQ7 755 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 NFKBIZQ9BYH8 718 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 MAN1C1Q9NR34 630 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 TRPM5Q9NZQ8 1165 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 SCOCQ9UIL1 159 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 MAGEA9P43362 315 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 RGMBQ6NW40 437 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 DNAJC14Q6Y2X3 702 aaPredicted RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 DONSONQ9NYP3 566 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 ARL2BPQ9Y2Y0 163 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 TGFB3P10600 412 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 CCR1P32246 355 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 MAP2K5Q13163 448 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 STILQ15468 1287 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 FNDC3BQ53EP0 1204 aaKnown RBP9.36□□□□□ -0.91
CDH11-202ENST00000394156 LINGO4Q6UY18 593 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 EXD1Q8NHP7 514 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 TUBGCP3Q96CW5 907 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 GPR20Q99678 358 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 CAB39LQ9H9S4 337 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 PCDHB5Q9Y5E4 795 aa9.36□□□□□ -0.91
CDH11-202ENST00000394156 A0A1W2PQ67 120 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 C2orf81A6NN90 581 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 NFKBIEO00221 500 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 TBL1XO60907 577 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 MCF2P10911 925 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 YWHAQP27348 245 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 CCND3P30281 292 aaPredicted RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 HOXA7P31268 230 aaPredicted RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 TARBP2Q15633 366 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 RABGAP1LQ5R372 815 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 BRSK2Q8IWQ3 736 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 TDRD5Q8NAT2 981 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 RIN3Q8TB24 985 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 GTF3C2Q8WUA4 911 aaPredicted RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 HMGXB4Q9UGU5 601 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 SDR42E2A6NKP2 422 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 XPO1O14980 1071 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 ZNF280DQ6N043 979 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 SYDE1Q6ZW31 735 aaPredicted RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 ANKS1BQ7Z6G8 1248 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDH11-202ENST00000394156 TCP10LQ8TDR4 215 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 TMEM120AQ9BXJ8 343 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 ZNF446Q9NWS9 450 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 SUFUQ9UMX1 484 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms