RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 TAC4Q86UU9 113 aa11.35□□□□□ -0.59
CASP3-202ENST00000393585 SPATA2LQ8IUW3 424 aaPredicted RBP11.35□□□□□ -0.59
CASP3-202ENST00000393585 URGCPQ8TCY9 931 aa11.35□□□□□ -0.59
CASP3-202ENST00000393585 TFB1MQ8WVM0 346 aaKnown RBP11.35□□□□□ -0.59
CASP3-202ENST00000393585 CENPTQ96BT3 561 aa11.35□□□□□ -0.59
CASP3-202ENST00000393585 PHACTR1Q9C0D0 580 aa11.35□□□□□ -0.59
CASP3-202ENST00000393585 RCOR3Q9P2K3 495 aaPredicted RBP11.35□□□□□ -0.59
CASP3-202ENST00000393585 HCSTQ9UBK5 93 aa11.35□□□□□ -0.59
CASP3-202ENST00000393585 FKTNO75072 461 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 ERCC2P18074 760 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 TYMPP19971 482 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 PHBP35232 272 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 GRIK1P39086 918 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 PGFP49763 221 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 SLC5A3P53794 718 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 FAM189BP81408 668 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 GPNMBQ14956 572 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 SDHAF4Q5VUM1 108 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 PM20D1Q6GTS8 502 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 DENND5BQ6ZUT9 1274 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 TADA2BQ86TJ2 420 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 TAX1BP1Q86VP1 789 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 SCN4BQ8IWT1 228 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 VPS52Q8N1B4 723 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 RIBC1Q8N443 379 aaPredicted RBP11.34□□□□□ -0.59
CASP3-202ENST00000393585 CCNYQ8ND76 341 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 HTR3CQ8WXA8 447 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 SLC9A7Q96T83 725 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 COLEC11Q9BWP8 271 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 TKTL2Q9H0I9 626 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 ABI2Q9NYB9 513 aaPredicted RBP11.34□□□□□ -0.59
CASP3-202ENST00000393585 SEPT10Q9P0V9 454 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 FBXW11Q9UKB1 542 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 LAMA2P24043 3122 aaKnown RBP11.34□□□□□ -0.59
CASP3-202ENST00000393585 SRRM3A6NNA2 597 aaPredicted RBP11.34□□□□□ -0.59
CASP3-202ENST00000393585 SPAG7O75391 227 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 GNRH1P01148 92 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 SELPP16109 830 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 KRT15P19012 456 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 GRIA1P42261 906 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 YWHAGP61981 247 aaKnown RBP eCLIP11.34□□□□□ -0.59
CASP3-202ENST00000393585 DPYSQ14117 519 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 ARHGEF18Q6ZSZ5 1173 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 TRABD2AQ86V40 505 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 CAND1Q86VP6 1230 aaKnown RBP11.34□□□□□ -0.59
CASP3-202ENST00000393585 C4orf33Q8N1A6 199 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 GDAP1Q8TB36 358 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 DYDC1Q8WWB3 177 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 NTAN1Q96AB6 310 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 FAM193BQ96PV7 902 aaPredicted RBP11.34□□□□□ -0.59
CASP3-202ENST00000393585 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.34□□□□□ -0.59
CASP3-202ENST00000393585 PRDM12Q9H4Q4 367 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 WDCPQ9H6R7 721 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 NUDT5Q9UKK9 219 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 TEX264Q9Y6I9 313 aa11.34□□□□□ -0.59
CASP3-202ENST00000393585 DCLK1O15075 740 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 GCATO75600 419 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 MAP2K2P36507 400 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 GEMIN4P57678 1058 aaKnown RBP11.33□□□□□ -0.6
CASP3-202ENST00000393585 TPI1P60174 286 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 MAPRE1Q15691 268 aaKnown RBP11.33□□□□□ -0.6
CASP3-202ENST00000393585 ANKRD20A2Q5SQ80 823 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 ANKRD20A1Q5TYW2 823 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 ANKRD20A3Q5VUR7 823 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 PPP1R21Q6ZMI0 780 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 CEP57Q86XR8 500 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 TDRPQ86YL5 185 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 DQX1Q8TE96 717 aaKnown RBP11.33□□□□□ -0.6
CASP3-202ENST00000393585 RNF34Q969K3 372 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 PGAP3Q96FM1 320 aaPredicted RBP11.33□□□□□ -0.6
CASP3-202ENST00000393585 CHMP6Q96FZ7 201 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 CFAP36Q96G28 342 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 P2RY11Q96G91 374 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 B3GALT6Q96L58 329 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 PGLYRP2Q96PD5 576 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 PAFAH2Q99487 392 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 TRIM56Q9BRZ2 755 aaKnown RBP11.33□□□□□ -0.6
CASP3-202ENST00000393585 UNC93B1Q9H1C4 597 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 PSMC3IPQ9P2W1 217 aaPredicted RBP11.33□□□□□ -0.6
CASP3-202ENST00000393585 PHF24Q9UPV7 400 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 NUP205Q92621 2012 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 A0A1W2PPM1 405 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 ARHGEF37A1IGU5 675 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 C5orf60A6NFR6 353 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 GPR15P49685 360 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 SCAPQ12770 1279 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 SEMA3BQ13214 749 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 C4orf50Q6ZRC1 276 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 CPLX4Q7Z7G2 160 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 FAM126BQ8IXS8 530 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 ZNF317Q96PQ6 595 aaPredicted RBP11.33□□□□□ -0.6
CASP3-202ENST00000393585 TMEM161AQ9NX61 479 aa11.33□□□□□ -0.6
CASP3-202ENST00000393585 A0A0A0MRY4 1105 aa11.32□□□□□ -0.6
CASP3-202ENST00000393585 TCRBV9S1A1TA0A576 114 aa11.32□□□□□ -0.6
CASP3-202ENST00000393585 KCNK1O00180 336 aa11.32□□□□□ -0.6
CASP3-202ENST00000393585 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
CASP3-202ENST00000393585 TADA2AO75478 443 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms