RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 PCDHA10Q9Y5I2 948 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 COL14A1Q05707 1796 aaKnown RBP16.86■□□□□ 0.29
PHTF1-205ENST00000393357 PRPSAP2O60256 369 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 CLIC3O95833 236 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 RARS2Q5T160 578 aaKnown RBP16.85■□□□□ 0.29
PHTF1-205ENST00000393357 LPCAT2Q7L5N7 544 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 CAND1Q86VP6 1230 aaKnown RBP16.85■□□□□ 0.29
PHTF1-205ENST00000393357 HEXIM2Q96MH2 286 aaKnown RBP16.85■□□□□ 0.29
PHTF1-205ENST00000393357 SNX13Q9Y5W8 968 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 RALBP11234 206 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 HDCP19113 662 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 MS4A2Q01362 244 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 SLC25A11Q02978 314 aaKnown RBP16.85■□□□□ 0.29
PHTF1-205ENST00000393357 CBX3Q13185 183 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 PITRM1Q5JRX3 1037 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 TRIM72Q6ZMU5 477 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 SH2D5Q6ZV89 423 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 LRRC71Q8N4P6 559 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 NAT16Q8N8M0 369 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 ATP6V1E2Q96A05 226 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 SLC15A5A6NIM6 579 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 C3orf70A6NLC5 250 aaPredicted RBP16.85■□□□□ 0.29
PHTF1-205ENST00000393357 NUMBP49757 651 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 RALGDSQ12967 914 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 ANO4Q32M45 955 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 PPP1R2P3Q6NXS1 205 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 ARL10Q8N8L6 244 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 CCNYQ8ND76 341 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 KLC2Q9H0B6 622 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 IL1RL2Q9HB29 575 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 POPDC2Q9HBU9 364 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 PFDN4Q9NQP4 134 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 ZNF180Q9UJW8 692 aa16.85■□□□□ 0.29
PHTF1-205ENST00000393357 RBMX2Q9Y388 322 aaKnown RBP16.85■□□□□ 0.29
PHTF1-205ENST00000393357 NDC80O14777 642 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 RXRBP28702 533 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 GBE1Q04446 702 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 ART3Q13508 389 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 DCTN2Q13561 401 aaKnown RBP16.84■□□□□ 0.29
PHTF1-205ENST00000393357 SLC44A4Q53GD3 710 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 CMTM5Q96DZ9 223 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 SIRPGQ9P1W8 387 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 SMIM31A0A1B0GVY4 71 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 APOC4-APOC2K7ER74 178 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 APOC2P02655 101 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 FAM58BPP0C7Q3 252 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 TFE3P19532 575 aaPredicted RBP16.84■□□□□ 0.29
PHTF1-205ENST00000393357 NME5P56597 212 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 MAP3K21Q5TCX8 1036 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 KLC3Q6P597 504 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 CHST15Q7LFX5 561 aaPredicted RBP16.84■□□□□ 0.29
PHTF1-205ENST00000393357 CLVS1Q8IUQ0 354 aaPredicted RBP16.84■□□□□ 0.29
PHTF1-205ENST00000393357 PLD6Q8N2A8 252 aaKnown RBP16.84■□□□□ 0.29
PHTF1-205ENST00000393357 CCNYL1Q8N7R7 359 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 CIB1Q99828 191 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 SSU72Q9NP77 194 aaKnown RBP16.84■□□□□ 0.29
PHTF1-205ENST00000393357 RIPK3Q9Y572 518 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 C10orf71Q711Q0 1435 aa16.84■□□□□ 0.29
PHTF1-205ENST00000393357 H3BNX3 289 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 ZC3H11AO75152 810 aaKnown RBP eCLIP16.83■□□□□ 0.29
PHTF1-205ENST00000393357 KLHL2O95198 593 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 PGM5Q15124 567 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 ANGEL2Q5VTE6 544 aaKnown RBP16.83■□□□□ 0.29
PHTF1-205ENST00000393357 B3GNT9Q6UX72 402 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 C4orf19Q8IY42 314 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 LILRA2Q8N149 483 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 C12orf29Q8N999 325 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 RXFP2Q8WXD0 754 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 ATP2A3Q93084 1043 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 PAIP1Q9H074 479 aaKnown RBP16.83■□□□□ 0.29
PHTF1-205ENST00000393357 GPAMQ9HCL2 828 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 V9GYQ6 96 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 DNAH12Q6ZR08 3092 aa16.83■□□□□ 0.29
PHTF1-205ENST00000393357 CKMT2P17540 419 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 MPSTP25325 297 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 MGAT1P26572 445 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 SERPINB8P50452 374 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 IRF9Q00978 393 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 SLC10A2Q12908 348 aaPredicted RBP16.83■□□□□ 0.28
PHTF1-205ENST00000393357 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 SCYL1Q96KG9 808 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 TWNKQ96RR1 684 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 Q9H521 79 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 ZNFX1Q9P2E3 1918 aaKnown RBP16.83■□□□□ 0.28
PHTF1-205ENST00000393357 SF3B1O75533 1304 aaKnown RBP eCLIP16.83■□□□□ 0.286e-6■■■■■ 62.3
PHTF1-205ENST00000393357 C9JVG2 144 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 FGF3P11487 239 aaPredicted RBP16.83■□□□□ 0.28
PHTF1-205ENST00000393357 KLF10Q13118 480 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 RNF168Q8IYW5 571 aaPredicted RBP16.83■□□□□ 0.28
PHTF1-205ENST00000393357 GAB3Q8WWW8 586 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 LPIN3Q9BQK8 851 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 TMEM79Q9BSE2 394 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 PTTG2Q9NZH5 202 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 TMX2Q9Y320 296 aa16.83■□□□□ 0.28
PHTF1-205ENST00000393357 KDM4FA0A1W2PPD8 638 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 ATP9BO43861 1147 aa16.82■□□□□ 0.28
PHTF1-205ENST00000393357 ALDOAP04075 364 aaKnown RBP16.82■□□□□ 0.28
PHTF1-205ENST00000393357 CSE1LP55060 971 aaKnown RBP16.82■□□□□ 0.28
PHTF1-205ENST00000393357 EMC2Q15006 297 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms