RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 SIK3Q9Y2K2 1263 aa11.84□□□□□ -0.51
TRAF3IP2-208ENST00000392556 MYH10P35580 1976 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 KCNK3O14649 394 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 CAPN9O14815 690 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 SERPINB7O75635 380 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 C8AP07357 584 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 RPL9P32969 192 aaKnown RBP11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PMS1P54277 932 aaKnown RBP11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 RNASE9P60153 205 aaKnown RBP11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 FOXK2Q01167 660 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 INAQ16352 499 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PPP2R5EQ16537 467 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 CCDC153Q494R4 210 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 C16orf87Q6PH81 154 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 DTHD1Q6ZMT9 781 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 CYP4X1Q8N118 509 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 SYN2Q92777 582 aaPredicted RBP11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 NKD2Q969F2 451 aaPredicted RBP11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 DUSP9Q99956 384 aaKnown RBP11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 NTPCRQ9BSD7 190 aaKnown RBP11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ARHGAP28Q9P2N2 729 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 STARD13Q9Y3M8 1113 aa11.83□□□□□ -0.52
TRAF3IP2-208ENST00000392556 E9PBE3 544 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 F8W810 466 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 H7C4K7 107 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 KRIT1O00522 736 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 SYN3O14994 580 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 LSM1O15116 133 aaKnown RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 B3GAT3O94766 335 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 TARSP26639 723 aaKnown RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ATP5DP30049 168 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 HALP42357 657 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PFKPQ01813 784 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 GFPT1Q06210 699 aaPredicted RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 KCNMA1Q12791 1236 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PTGDRQ13258 359 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 HNRNPDQ14103 355 aaKnown RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 KYAT1Q16773 422 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 NEPROQ6NW34 567 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PRSS55Q6UWB4 352 aaPredicted RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 KBTBD2Q8IY47 623 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 BBS5Q8N3I7 341 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PIP4K2CQ8TBX8 421 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ERP27Q96DN0 273 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 LRRC37BQ96QE4 947 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 OSBPL6Q9BZF3 934 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 DDX47Q9H0S4 455 aaKnown RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 SMOC2Q9H3U7 446 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 CHKBQ9Y259 395 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PLXNA3P51805 1871 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 MYO10Q9HD67 2058 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 BICDL2A1A5D9 508 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PRR23AA6NEV1 266 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 DDX3XO00571 662 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 RASGRF2O14827 1237 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 CBFA2T3O75081 653 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 KCNE1P15382 129 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 CRABP2P29373 138 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 NPTX2P47972 431 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PRKCQQ04759 706 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 UPP1Q16831 310 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 HYIQ5T013 277 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 EEF1DP3Q658K8 133 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 HGSNATQ68CP4 663 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ALKAL1Q6UXT8 129 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ACAD11Q709F0 780 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 GET4Q7L5D6 327 aaPredicted RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 BAP1Q92560 729 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 B3GALT6Q96L58 329 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ACO2Q99798 780 aaKnown RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PAAF1Q9BRP4 392 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 TUBB6Q9BUF5 446 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PTPRHQ9HD43 1115 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 KMT5AQ9NQR1 393 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 FAM86C1Q9NVL1 165 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 AMACRQ9UHK6 382 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ANGPTL2Q9UKU9 493 aa11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 TTC7AQ9ULT0 858 aaPredicted RBP11.82□□□□□ -0.52
TRAF3IP2-208ENST00000392556 C2orf16Q68DN1 1984 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 LRRC53A6NM62 1247 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 TTI1O43156 1089 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 KRT36O76013 467 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 MICAL2O94851 1124 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PYGMP11217 842 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 RPL17P18621 184 aaKnown RBP11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 S100A1P23297 94 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 GTF2H1P32780 548 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 PPP1R2P41236 205 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 MTIF2P46199 727 aaKnown RBP11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 GALK1P51570 392 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 RPL26P61254 145 aaKnown RBP11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 SLC29A2Q14542 456 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ZNF568Q3ZCX4 644 aa11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 ZNF362Q5T0B9 420 aaPredicted RBP11.81□□□□□ -0.52
TRAF3IP2-208ENST00000392556 SLC8B1Q6J4K2 584 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms