RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SPAG5Q96R06 1193 aa12.32□□□□□ -0.44
RFC4-202ENST00000392481 SLC2A11Q9BYW1 496 aa12.32□□□□□ -0.44
RFC4-202ENST00000392481 SYNCQ9H7C4 482 aa12.32□□□□□ -0.44
RFC4-202ENST00000392481 NLRC4Q9NPP4 1024 aa12.32□□□□□ -0.44
RFC4-202ENST00000392481 EBF1Q9UH73 591 aa12.32□□□□□ -0.44
RFC4-202ENST00000392481 SMG5Q9UPR3 1016 aaKnown RBP12.32□□□□□ -0.44
RFC4-202ENST00000392481 SGK1O00141 431 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 AXIN1O15169 862 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 ACSL4O60488 711 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 GFPT2O94808 682 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 TRUB2O95900 331 aaKnown RBP12.31□□□□□ -0.44
RFC4-202ENST00000392481 IGLV3-25P01717 112 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 ERBB2P04626 1255 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 SOX5P35711 763 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 STAT1P42224 750 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 CDK17Q00537 523 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 SLC6A3Q01959 620 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 CRY1Q16526 586 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 EOGTQ5NDL2 527 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 TAF3Q5VWG9 929 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 OLFML1Q6UWY5 402 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 FAM183BPQ6ZVS7 135 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 SLC26A9Q7LBE3 791 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 TAC4Q86UU9 113 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 ZDHHC17Q8IUH5 632 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 ZNF513Q8N8E2 541 aaPredicted RBP12.31□□□□□ -0.44
RFC4-202ENST00000392481 TSTD1Q8NFU3 115 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 ADAM32Q8TC27 787 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 RUBCNQ92622 972 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 TMA16Q96EY4 203 aaKnown RBP12.31□□□□□ -0.44
RFC4-202ENST00000392481 SLC2A13Q96QE2 648 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 DDX50Q9BQ39 737 aaKnown RBP12.31□□□□□ -0.44
RFC4-202ENST00000392481 NOCTQ9UK39 431 aaKnown RBP12.31□□□□□ -0.44
RFC4-202ENST00000392481 RAB23Q9ULC3 237 aa12.31□□□□□ -0.44
RFC4-202ENST00000392481 SYCE3A1L190 88 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 PRRT4C9JH25 899 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 IRAK2O43187 625 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 TSPAN3O60637 253 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 ADAM23O75077 832 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 HOXD9P28356 352 aaPredicted RBP12.3□□□□□ -0.44
RFC4-202ENST00000392481 GABRB2P47870 512 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 CDR2Q01850 454 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 SIM2Q14190 667 aaPredicted RBP12.3□□□□□ -0.44
RFC4-202ENST00000392481 IQCB1Q15051 598 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 DCAF6Q58WW2 860 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 FAM133BQ5BKY9 247 aaKnown RBP12.3□□□□□ -0.44
RFC4-202ENST00000392481 MPP7Q5T2T1 576 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 TMEM92Q6UXU6 159 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 ERICH1Q86X53 443 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 DEFB106AQ8N104 65 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 MSANTD4Q8NCY6 345 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
RFC4-202ENST00000392481 GAB3Q8WWW8 586 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 C18orf8Q96DM3 657 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
RFC4-202ENST00000392481 HCN2Q9UL51 889 aa12.3□□□□□ -0.44
RFC4-202ENST00000392481 NPC1O15118 1278 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 RPP40O75818 363 aaKnown RBP12.29□□□□□ -0.44
RFC4-202ENST00000392481 ALDH1A2O94788 518 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 CAVIN2O95810 425 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 APOEP02649 317 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 MMEP08473 750 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 SLC2A3P11169 496 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 HNRNPLP14866 589 aaKnown RBP eCLIP12.29□□□□□ -0.44
RFC4-202ENST00000392481 NTSR1P30989 418 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 SCNN1AP37088 669 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 NOMO3P69849 1222 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 SRSF5Q13243 272 aaKnown RBP12.29□□□□□ -0.44
RFC4-202ENST00000392481 EIF4EBP2Q13542 120 aaPredicted RBP12.29□□□□□ -0.44
RFC4-202ENST00000392481 E2F5Q15329 346 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 SKOR2Q2VWA4 1001 aaPredicted RBP12.29□□□□□ -0.44
RFC4-202ENST00000392481 FILIP1LQ4L180 1135 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 ZC3H12AQ5D1E8 599 aaKnown RBP12.29□□□□□ -0.44
RFC4-202ENST00000392481 PIK3R6Q5UE93 754 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 EGFLAMQ63HQ2 1017 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 RNF43Q68DV7 783 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 LAIR1Q6GTX8 287 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 NADSYN1Q6IA69 706 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 RFWD3Q6PCD5 774 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 PRR23BQ6ZRT6 265 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 CEP68Q76N32 757 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 ANKS1BQ7Z6G8 1248 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 RASSF3Q86WH2 238 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 SLC20A1Q8WUM9 679 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 FAM204AQ9H8W3 233 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 POLMQ9NP87 494 aaPredicted RBP12.29□□□□□ -0.44
RFC4-202ENST00000392481 ZDHHC4Q9NPG8 344 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.29□□□□□ -0.44
RFC4-202ENST00000392481 CLEC4EQ9ULY5 219 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 DMXL1Q9Y485 3027 aa12.29□□□□□ -0.44
RFC4-202ENST00000392481 GOLGA6L7A0A1B0GV03 622 aa12.28□□□□□ -0.44
RFC4-202ENST00000392481 TEX33O43247 280 aa12.28□□□□□ -0.44
RFC4-202ENST00000392481 TIMM44O43615 452 aa12.28□□□□□ -0.44
RFC4-202ENST00000392481 DAB1O75553 588 aa12.28□□□□□ -0.44
RFC4-202ENST00000392481 GRAP2O75791 330 aa12.28□□□□□ -0.44
RFC4-202ENST00000392481 CHRNB2P17787 502 aa12.28□□□□□ -0.44
RFC4-202ENST00000392481 SLC6A4P31645 630 aa12.28□□□□□ -0.44
RFC4-202ENST00000392481 GBP1P32455 592 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms