RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 TRIM42Q8IWZ5 723 aa21.65■■□□□ 1.06
COL23A1-201ENST00000390654 SH3GL3Q99963 347 aa21.65■■□□□ 1.06
COL23A1-201ENST00000390654 ECSITQ9BQ95 431 aa21.65■■□□□ 1.06
COL23A1-201ENST00000390654 FZD8Q9H461 694 aa21.65■■□□□ 1.06
COL23A1-201ENST00000390654 PNPLA8Q9NP80 782 aa21.65■■□□□ 1.06
COL23A1-201ENST00000390654 A0A1B0GVG6 124 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 TXNDC9O14530 226 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 ADCY6O43306 1168 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 ALDOAP04075 364 aaKnown RBP21.64■■□□□ 1.06
COL23A1-201ENST00000390654 ARRB2P32121 409 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 MLH1P40692 756 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 GABRB2P47870 512 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 ATXN3P54252 364 aaPredicted RBP21.64■■□□□ 1.06
COL23A1-201ENST00000390654 USP4Q13107 963 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 Q3C1V9 767 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 NET1Q7Z628 596 aaPredicted RBP21.64■■□□□ 1.06
COL23A1-201ENST00000390654 MRPL45Q9BRJ2 306 aaKnown RBP21.64■■□□□ 1.06
COL23A1-201ENST00000390654 TXNRD2Q9NNW7 524 aa21.64■■□□□ 1.06
COL23A1-201ENST00000390654 RNASEH1O60930 286 aaKnown RBP21.64■■□□□ 1.05
COL23A1-201ENST00000390654 USP12O75317 370 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 ERVK-10P10266 1014 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 MGAT1P26572 445 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 SERPINB6P35237 376 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 ASPHQ12797 758 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 GLRA4Q5JXX5 417 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 THAP1Q9NVV9 213 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 ZNF112Q9UJU3 913 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 ZNF180Q9UJW8 692 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 EMCNQ9ULC0 261 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 PHIPQ8WWQ0 1821 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 CCDC78A2IDD5 438 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 AHCYL1O43865 530 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 PDGFRBP09619 1106 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 CRHR1P34998 444 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 MSX2P35548 267 aaPredicted RBP21.64■■□□□ 1.05
COL23A1-201ENST00000390654 PDE1CQ14123 709 aaPredicted RBP21.64■■□□□ 1.05
COL23A1-201ENST00000390654 TRMT5Q32P41 509 aaKnown RBP21.64■■□□□ 1.05
COL23A1-201ENST00000390654 CMPK2Q5EBM0 449 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 AP1ARQ63HQ0 302 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 LBX2Q6XYB7 198 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 RASSF3Q86WH2 238 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 PIWIL2Q8TC59 973 aaKnown RBP21.64■■□□□ 1.05
COL23A1-201ENST00000390654 AZIN2Q96A70 460 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 AGAP3Q96P47 875 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 TRIM4Q9C037 500 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 BARX2Q9UMQ3 279 aaPredicted RBP21.64■■□□□ 1.05
COL23A1-201ENST00000390654 SOX13Q9UN79 622 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 APOBEC2Q9Y235 224 aaKnown RBP21.64■■□□□ 1.05
COL23A1-201ENST00000390654 PPME1Q9Y570 386 aa21.64■■□□□ 1.05
COL23A1-201ENST00000390654 SDR42E2A6NKP2 422 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 PAPSS1O43252 624 aaPredicted RBP21.63■■□□□ 1.05
COL23A1-201ENST00000390654 SNNO75324 88 aaPredicted RBP21.63■■□□□ 1.05
COL23A1-201ENST00000390654 SERPINA6P08185 405 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 ADORA2BP29275 332 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 BOLA3Q53S33 107 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 HEATR6Q6AI08 1181 aaKnown RBP21.63■■□□□ 1.05
COL23A1-201ENST00000390654 RNF111Q6ZNA4 994 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 ILDR2Q71H61 639 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 MYLK4Q86YV6 388 aaPredicted RBP21.63■■□□□ 1.05
COL23A1-201ENST00000390654 HPS6Q86YV9 775 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 CCDC185Q8N715 623 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 C2orf40Q9H1Z8 148 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 A6NJR5 290 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 FAM159BA6NKW6 160 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 TRDMT1O14717 391 aaKnown RBP21.63■■□□□ 1.05
COL23A1-201ENST00000390654 GABBR2O75899 941 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 GSRP00390 522 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 TXNP10599 105 aaKnown RBP21.63■■□□□ 1.05
COL23A1-201ENST00000390654 GOT1P17174 413 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 RPS12P25398 132 aaKnown RBP21.63■■□□□ 1.05
COL23A1-201ENST00000390654 ITGA9Q13797 1035 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 TMEM132DQ14C87 1099 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 TEDDM1Q5T9Z0 273 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 MAVSQ7Z434 540 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 FAM131BQ86XD5 332 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 TP53INP2Q8IXH6 220 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 CHST13Q8NET6 341 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 NT5C1AQ9BXI3 368 aa21.63■■□□□ 1.05
COL23A1-201ENST00000390654 PSME4Q14997 1843 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 E9PBE3 544 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 KLHL41O60662 606 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 USP2O75604 605 aaPredicted RBP21.62■■□□□ 1.05
COL23A1-201ENST00000390654 OLFML1Q6UWY5 402 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 PHTF2Q8N3S3 785 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 CCNYQ8ND76 341 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 KHSRPQ92945 711 aaKnown RBP eCLIP21.62■■□□□ 1.05
COL23A1-201ENST00000390654 KIF12Q96FN5 646 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 C12orf42Q96LP6 360 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 GBA2Q9HCG7 927 aaPredicted RBP21.62■■□□□ 1.05
COL23A1-201ENST00000390654 XPNPEP3Q9NQH7 507 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 TMEM216Q9P0N5 145 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 OPHN1O60890 802 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 SIN3BO75182 1162 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 CPOXP36551 454 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 CCNFP41002 786 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 INHBEP58166 350 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 PPP2R5DQ14738 602 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 ACAP1Q15027 740 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 EML3Q32P44 896 aa21.62■■□□□ 1.05
COL23A1-201ENST00000390654 DNAL1Q4LDG9 190 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms