RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 RFX8Q6ZV50 586 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 CPLX4Q7Z7G2 160 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 SRLQ86TD4 932 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 ANKRD42Q8N9B4 389 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 SLAIN1Q8ND83 568 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 HTR3CQ8WXA8 447 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 LGMNQ99538 433 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 PNPLA8Q9NP80 782 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 RRP15Q9Y3B9 282 aaKnown RBP18.8■□□□□ 0.6
ACTN4-202ENST00000390009 FAM72CH0Y354 149 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 ARVCFO00192 962 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 DRD4P21917 467 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 KLHL38Q2WGJ6 581 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 FAM72AQ5TYM5 149 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 BSPRYQ5W0U4 402 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 FAM72DQ6L9T8 149 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 FAM72BQ86X60 149 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 SCML4Q8N228 414 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 URGCPQ8TCY9 931 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 DYDC1Q8WWB3 177 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 COLEC11Q9BWP8 271 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 NR2E3Q9Y5X4 410 aa18.8■□□□□ 0.6
ACTN4-202ENST00000390009 KBTBD13C9JR72 458 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 F9P00740 461 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 AMHP03971 560 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 KRT15P19012 456 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 SEMA3BQ13214 749 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 PAFAH1B3Q15102 231 aaKnown RBP18.79■□□□□ 0.6
ACTN4-202ENST00000390009 PKN2Q16513 984 aaKnown RBP18.79■□□□□ 0.6
ACTN4-202ENST00000390009 ARHGEF18Q6ZSZ5 1173 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 AGGF1Q8N302 714 aaeCLIP18.79■□□□□ 0.6
ACTN4-202ENST00000390009 NETO2Q8NC67 525 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 DCLK1O15075 740 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 PRKD1Q15139 912 aaPredicted RBP18.79■□□□□ 0.6
ACTN4-202ENST00000390009 ARL13BQ3SXY8 428 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 LRRC8DQ7L1W4 858 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 CAND1Q86VP6 1230 aaKnown RBP18.79■□□□□ 0.6
ACTN4-202ENST00000390009 SPATA2LQ8IUW3 424 aaPredicted RBP18.79■□□□□ 0.6
ACTN4-202ENST00000390009 COLGALT2Q8IYK4 626 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 MCUQ8NE86 351 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 PAFAH2Q99487 392 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 MLXIPLQ9NP71 852 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 TBC1D13Q9NVG8 400 aa18.79■□□□□ 0.6
ACTN4-202ENST00000390009 MYO16Q9Y6X6 1858 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 PIAS1O75925 651 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 TPSB2P20231 275 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 GRK4P32298 578 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 AP1B1Q10567 949 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 PDK1Q15118 436 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 TPSAB1Q15661 275 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 ANKRD20A2Q5SQ80 823 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 ANKRD20A1Q5TYW2 823 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 ANKRD20A3Q5VUR7 823 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 C4orf50Q6ZRC1 276 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 SPATS2Q86XZ4 545 aaKnown RBP18.78■□□□□ 0.6
ACTN4-202ENST00000390009 SCAMP5Q8TAC9 235 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 DHRS4Q9BTZ2 278 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 FTHL17Q9BXU8 183 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 TRABDQ9H4I3 376 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 WDCPQ9H6R7 721 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 SENP1Q9P0U3 644 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 FAM169AQ9Y6X4 670 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 TTC3P53804 2025 aa18.78■□□□□ 0.6
ACTN4-202ENST00000390009 A0A0A0MRY4 1105 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 TCRBV9S1A1TA0A576 114 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 TMEM189-UBE2V1I3L0A0 370 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 SPAG6O75602 509 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 ERCC2P18074 760 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 OR1G1P47890 313 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 CXCR3P49682 368 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 TPI1P60174 286 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 YWHAGP61981 247 aaKnown RBP eCLIP18.77■□□□□ 0.61e-6■□□□□ 9.4
ACTN4-202ENST00000390009 ADGRD1Q6QNK2 874 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 TAC4Q86UU9 113 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 TAX1BP1Q86VP1 789 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 SPATA13Q96N96 652 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 KIF9Q9HAQ2 790 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 NKIRAS1Q9NYS0 192 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 KANSL3Q9P2N6 904 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 DNAJB4Q9UDY4 337 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 PHF24Q9UPV7 400 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 VWA8A3KMH1 1905 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 PPP1R12AO14974 1030 aaPredicted RBP18.77■□□□□ 0.6
ACTN4-202ENST00000390009 OR4Q2P0C623 313 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 SELPP16109 830 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 GLUD2P49448 558 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 SEMA5AQ13591 1074 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 DENND5BQ6ZUT9 1274 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 LRRC34Q8IZ02 419 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 P2RY11Q96G91 374 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 CYTH2Q99418 400 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 TKTL2Q9H0I9 626 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 PRDM12Q9H4Q4 367 aa18.77■□□□□ 0.6
ACTN4-202ENST00000390009 NUP205Q92621 2012 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 FAM47DPA6NHR8 397 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 MAP2K2P36507 400 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 GRIK1P39086 918 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 HCAR3P49019 387 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 SLC5A3P53794 718 aa18.76■□□□□ 0.59
ACTN4-202ENST00000390009 GKAP1Q5VSY0 366 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms