RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 H7C0C1 242 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 EEF2KO00418 725 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 RTN3O95197 1032 aaPredicted RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 ATF2P15336 505 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 ATP5OP48047 213 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 EFEMP1Q12805 493 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 EIF4EBP2Q13542 120 aaPredicted RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 NCBP2-AS2Q69YL0 99 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 PSRC1Q6PGN9 363 aaPredicted RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 BEND5Q7L4P6 421 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 VSIG1Q86XK7 387 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 PSTKQ8IV42 348 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 FAM71DQ8N9W8 422 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 CAVIN3Q969G5 261 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 TRIM62Q9BVG3 475 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 SIK2Q9H0K1 926 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 AAASQ9NRG9 546 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 MRPL17Q9NRX2 175 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 XPO7Q9UIA9 1087 aaKnown RBP12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 HPCAL4Q9UM19 191 aa12.63□□□□□ -0.39
SPTBN1-203ENST00000389980 MYO18AQ92614 2054 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 TEX28O15482 410 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 TLL1O43897 1013 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 MOCS2O96007 188 aaPredicted RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 RARGP13631 454 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 ATP2A2P16615 1042 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 TGM2P21980 687 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 GBP1P32455 592 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 PPM1AP35813 382 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 LMNB2Q03252 620 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 SCAPQ12770 1279 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 ARL13BQ3SXY8 428 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 DARS2Q6PI48 645 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 SYDE1Q6ZW31 735 aaPredicted RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 SNF8Q96H20 258 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 FMO2Q99518 471 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 CCSER2Q9H7U1 834 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 ALG13Q9NP73 1137 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 OR12D3Q9UGF7 316 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 NR2E3Q9Y5X4 410 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 ZNF487B1APH4 448 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 H3BRJ5 948 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 TUFMP49411 452 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 ITGA8P53708 1063 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 SEMA3BQ13214 749 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 P3H1Q32P28 736 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 RFX8Q6ZV50 586 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 MIB1Q86YT6 1006 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 TP53INP2Q8IXH6 220 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 CCDC89Q8N998 374 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 EIF1ADQ8N9N8 165 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 RSAD2Q8WXG1 361 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 HERVK_113Q902F9 699 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 CLP1Q92989 425 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 ART4Q93070 314 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 PWWP2AQ96N64 755 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 RAD9AQ99638 391 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 TLR8Q9NR97 1041 aaKnown RBP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 PSD3Q9NYI0 1048 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 VPS18Q9P253 973 aa12.62□□□□□ -0.39
SPTBN1-203ENST00000389980 TRANK1O15050 2925 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 MFSD11O43934 449 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 SRGAP2BP0DMP2 458 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 MYOGP15173 224 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 TPI1P60174 286 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 GPS1Q13098 491 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 CALCOCO2Q13137 446 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 RAB33AQ14088 237 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 DPYSQ14117 519 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 C10orf120Q5SQS8 335 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 TPGS2Q68CL5 300 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 FRMD8P1Q9BZ68 369 aaPredicted RBP12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 ZBP1Q9H171 429 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 RASSF4Q9H2L5 321 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 DTLQ9NZJ0 730 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 YIPF1Q9Y548 306 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 DOCK6Q96HP0 2047 aa12.61□□□□□ -0.39
SPTBN1-203ENST00000389980 GRXCR1A8MXD5 290 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 PRRG1O14668 218 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 LILRB3O75022 631 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 PAGE1O75459 146 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 LRIG2O94898 1065 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ARHGEF15O94989 841 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 HMBSP08397 361 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 CNPP09543 421 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 RBL1P28749 1068 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 CCR1P32246 355 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 AIF1P55008 147 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 DHX9Q08211 1270 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 NNTQ13423 1086 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 IZUMO3Q5VZ72 239 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ARHGAP18Q8N392 663 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 DPF3Q92784 378 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 SERPINB11Q96P15 392 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 ARHGEF38Q9NXL2 777 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 WHRNQ9P202 907 aa12.6□□□□□ -0.39
SPTBN1-203ENST00000389980 RCOR3Q9P2K3 495 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms