RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 SLC27A5Q9Y2P5 690 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 DYRK1BQ9Y463 629 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 SHPRHQ149N8 1683 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 UNCXA6NJT0 531 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 H0Y3Z8 333 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 KRT16P08779 473 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 GLUD2P49448 558 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 PRKCQQ04759 706 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 MPP3Q13368 585 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 ZC3H12AQ5D1E8 599 aaKnown RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 MFSD7Q6UXD7 560 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 BRI3BPQ8WY22 251 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 ZIM3Q96PE6 472 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 C1QTNF7Q9BXJ2 289 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 NIFKQ9BYG3 293 aaKnown RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 ZCCHC17Q9NP64 241 aaKnown RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 OR12D3Q9UGF7 316 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 FAM50BQ9Y247 325 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 PCDHA3Q9Y5H8 950 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 IGKV6D-41A0A0C4DH26 115 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 SIGLEC16A6NMB1 481 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 SYCE1LA8MT33 242 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 KDSRQ06136 332 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 LRRC74AQ0VAA2 488 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 CLEC4DQ8WXI8 215 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 MTMR8Q96EF0 704 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 ING2Q9H160 280 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 RUVBL2Q9Y230 463 aaKnown RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 CAND2O75155 1236 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 ALOX15P16050 662 aaPredicted RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 MMP13P45452 471 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 BRCC3P46736 316 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 MGAT5Q09328 741 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 ACOX1Q15067 660 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 ACBD5Q5T8D3 534 aaPredicted RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 ARMC12Q5T9G4 340 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 CACUL1Q86Y37 369 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 NALCNQ8IZF0 1738 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 XRN1Q8IZH2 1706 aaKnown RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 FAM136AQ96C01 138 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 PPP1R16AQ96I34 528 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 PNKPQ96T60 521 aa10.55□□□□□ -0.72
PKP4-201ENST00000389757 COPS7BQ9H9Q2 264 aaPredicted RBP10.55□□□□□ -0.72
PKP4-201ENST00000389757 KCNK1O00180 336 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 RNF103O00237 685 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 GJB6O95452 261 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 ENO1P06733 434 aaKnown RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 SERPINA4P29622 427 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 OR1D2P34982 312 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 HPCAP84074 193 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 SEZ6LQ9BYH1 1024 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 DNAJC18Q9H819 358 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 MANSC1Q9H8J5 431 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 FAM153AQ9UHL3 310 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 TRPC5OSA6NMA1 111 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 PDZK1P1A8MUH7 402 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 IGF2BP3O00425 579 aaKnown RBP eCLIP10.54□□□□□ -0.723e-6■■■□□ 18.9
PKP4-201ENST00000389757 CNTFP26441 200 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 HSD17B3P37058 310 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 KCNK10P57789 538 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 SMARCB1Q12824 385 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 HIC1Q14526 733 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 RAP1GAP2Q684P5 730 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 FBXL19Q6PCT2 694 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 FAM183BPQ6ZVS7 135 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 RD3Q7Z3Z2 195 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 POLR1EQ9GZS1 481 aaKnown RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 ECT2Q9H8V3 914 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 GPAMQ9HCL2 828 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 STX18Q9P2W9 335 aaKnown RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 SIK3Q9Y2K2 1263 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 ACOT9Q9Y305 439 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 FAM32AQ9Y421 112 aaKnown RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 NCF1BA6NI72 391 aaPredicted RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 NCF1CA8MVU1 366 aaPredicted RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 EIF3HO15372 352 aaKnown RBP eCLIP10.54□□□□□ -0.72
PKP4-201ENST00000389757 KLHL2O95198 593 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 RBP1P09455 135 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 NCF1P14598 390 aaPredicted RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 CHCHD3Q9NX63 227 aaKnown RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 ATRNL1Q5VV63 1379 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 HNRNPCL1O60812 293 aaKnown RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 SOAT1P35610 550 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 PLPP4Q5VZY2 271 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 C9orf57Q5W0N0 161 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 SLC26A11Q86WA9 606 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 HOMEZQ8IX15 550 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 C7orf61Q8IZ16 206 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 SHOC2Q9UQ13 582 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 A0A0B4J269 797 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 ZNF7P17097 686 aaPredicted RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 PRKCIP41743 596 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 NPY2RP49146 381 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 AP2B1P63010 937 aa10.54□□□□□ -0.72
PKP4-201ENST00000389757 ILF2Q12905 390 aaKnown RBP10.54□□□□□ -0.72
PKP4-201ENST00000389757 INPP5AQ14642 412 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms