RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ADRA1BP35368 520 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 ACADSBP45954 432 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 SLC11A1P49279 550 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 NKX3-2P78367 333 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 TLE2Q04725 743 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 ACAP1Q15027 740 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 DRICH1Q6PGQ1 229 aaPredicted RBP10.5□□□□□ -0.73
LTN1-203ENST00000389195 DCLRE1AQ6PJP8 1040 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 PDCD7Q8N8D1 485 aaKnown RBP10.5□□□□□ -0.73
LTN1-203ENST00000389195 FBF1Q8TES7 1133 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 SPOCK2Q92563 424 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 TLCD1Q96CP7 247 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 ACBD6Q9BR61 282 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 ATP11BQ9Y2G3 1177 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 MAD1L1Q9Y6D9 718 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 USP3Q9Y6I4 520 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 CXorf49A8MYA2 514 aaPredicted RBP10.5□□□□□ -0.73
LTN1-203ENST00000389195 M0QZQ0 153 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 NDUFAB1O14561 156 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 SPATA31D3P0C874 917 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 CCL5P13501 91 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 EPHB2P29323 1055 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 RDXP35241 583 aaKnown RBP10.5□□□□□ -0.73
LTN1-203ENST00000389195 ARL4AP40617 200 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 SESN2P58004 480 aaPredicted RBP10.5□□□□□ -0.73
LTN1-203ENST00000389195 YWHAGP61981 247 aaKnown RBP eCLIP10.5□□□□□ -0.73
LTN1-203ENST00000389195 LMNB2Q03252 620 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 DUSP4Q13115 394 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 TFDP2Q14188 446 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 PDK2Q15119 407 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 CTXN3Q4LDR2 81 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 SPATA31D4Q6ZUB0 917 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 SCD5Q86SK9 330 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 PPIL6Q8IXY8 311 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 TMEM86AQ8N2M4 240 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 DQX1Q8TE96 717 aaKnown RBP10.5□□□□□ -0.73
LTN1-203ENST00000389195 SUSD3Q96L08 255 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 PKMYT1Q99640 499 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 HIPK3Q9H422 1215 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 VWA8A3KMH1 1905 aa10.5□□□□□ -0.73
LTN1-203ENST00000389195 TMEM120BA0PK00 339 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 WDR91A4D1P6 747 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 LRIG2O94898 1065 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 TOP3BO95985 862 aaKnown RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 ACRP10323 421 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 DNAJB2P25686 324 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 RAB27AP51159 221 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 ZKSCAN8Q15776 578 aaPredicted RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 MGAT5BQ3V5L5 792 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 FAM26DQ5JW98 314 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 TRMT10BQ6PF06 316 aaKnown RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 RNF19BQ6ZMZ0 732 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 RFX8Q6ZV50 586 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 SYDE1Q6ZW31 735 aaPredicted RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 TRMT10CQ7L0Y3 403 aaKnown RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 TFAP2DQ7Z6R9 452 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 CAND1Q86VP6 1230 aaKnown RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 CIR1Q86X95 450 aaPredicted RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 ZDHHC17Q8IUH5 632 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 PALM2Q8IXS6 379 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 SLAIN1Q8ND83 568 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 P2RY11Q96G91 374 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 SERPINB12Q96P63 405 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 CASD1Q96PB1 797 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 SHOX2O60902 331 aaPredicted RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 DAB1O75553 588 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 CPB1P15086 417 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 MAP2K2P36507 400 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 ABCG1P45844 678 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 CDK7P50613 346 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 TSPY1Q01534 308 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 DSC1Q08554 894 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 FAAP100Q0VG06 881 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 MORF4L2Q15014 288 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 RAB41Q5JT25 222 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 C14orf80Q86SX3 495 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 HOOK3Q86VS8 718 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 TTC13Q8NBP0 860 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 KCTD13Q8WZ19 329 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 NT5C3BQ969T7 300 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 ZNF419Q96HQ0 510 aaPredicted RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 CCT8L2Q96SF2 557 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 ZNF670Q9BS34 389 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 PLAC1Q9HBJ0 212 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 DMAP1Q9NPF5 467 aaPredicted RBP10.49□□□□□ -0.73
LTN1-203ENST00000389195 MARCH5Q9NX47 278 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 LRFN2Q9ULH4 789 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 SPEGQ15772 3267 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 RASA4BC9J798 803 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 GOLGA8TH3BQL2 631 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 RASA4O43374 803 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 CABYRO75952 493 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 BRAFP15056 766 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 TPH1P17752 444 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 KRT15P19012 456 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 PSMB4P28070 264 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 SKOR1P84550 965 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 KBTBD12Q3ZCT8 623 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 EFHC2Q5JST6 749 aa10.49□□□□□ -0.73
LTN1-203ENST00000389195 C6orf118Q5T5N4 469 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms