RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 SETSIPP0DME0 302 aa27.59■■■□□ 2.01
NPHP3-202ENST00000383282 OXTRP30559 389 aa27.59■■■□□ 2.01
NPHP3-202ENST00000383282 SERPINA13PQ6UXR4 307 aa27.59■■■□□ 2.01
NPHP3-202ENST00000383282 BHLHA9Q7RTU4 235 aa27.59■■■□□ 2.01
NPHP3-202ENST00000383282 NDRG1Q92597 394 aaKnown RBP27.59■■■□□ 2.01
NPHP3-202ENST00000383282 ABCC13Q9NSE7 274 aa27.59■■■□□ 2.01
NPHP3-202ENST00000383282 DNAAF2Q9NVR5 837 aaKnown RBP27.59■■■□□ 2.01
NPHP3-202ENST00000383282 CLEC4EQ9ULY5 219 aa27.59■■■□□ 2.01
NPHP3-202ENST00000383282 SPAARA0A1B0GVQ0 90 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 EPHX1P07099 455 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 NCAM1P13591 858 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 PMS1P54277 932 aaKnown RBP27.58■■■□□ 2.01
NPHP3-202ENST00000383282 LRMPQ12912 555 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 SLC14A1Q13336 389 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 STIM1Q13586 685 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 BSPRYQ5W0U4 402 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 CADM4Q8NFZ8 388 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 UBA3Q8TBC4 463 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 KCTD13Q8WZ19 329 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 SLC35C1Q96A29 364 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 GPR174Q9BXC1 333 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 ZDHHC5Q9C0B5 715 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 METTL14Q9HCE5 456 aaKnown RBP27.58■■■□□ 2.01
NPHP3-202ENST00000383282 CNGB3Q9NQW8 809 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 SFMBT1Q9UHJ3 866 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 NFE2L3Q9Y4A8 694 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 CEP192Q8TEP8 1941 aa27.58■■■□□ 2.01
NPHP3-202ENST00000383282 TMEM8BA6NDV4 472 aa27.57■■■□□ 2
NPHP3-202ENST00000383282 LATS1O95835 1130 aa27.57■■■□□ 2
NPHP3-202ENST00000383282 MAOBP27338 520 aa27.57■■■□□ 2
NPHP3-202ENST00000383282 TPMTP51580 245 aa27.57■■■□□ 2
NPHP3-202ENST00000383282 OR2I1PQ8NGU4 316 aa27.57■■■□□ 2
NPHP3-202ENST00000383282 WFIKKN2Q8TEU8 576 aa27.57■■■□□ 2
NPHP3-202ENST00000383282 EDEM1Q92611 657 aa27.57■■■□□ 2
NPHP3-202ENST00000383282 ZFHX4Q86UP3 3567 aa27.57■■■□□ 2
NPHP3-202ENST00000383282 CEP295Q9C0D2 2601 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 A0A1B0GTW7 788 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 TRIM49BA6NDI0 452 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 H0Y626 953 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 O00370 1275 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 PSMA7O14818 248 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 TSPAN3O60637 253 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 TRIM16O95361 564 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 PRKCHP24723 683 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 HOXD9P28356 352 aaPredicted RBP27.56■■■□□ 2
NPHP3-202ENST00000383282 SCML4Q8N228 414 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 KDF1Q8NAX2 398 aaPredicted RBP27.56■■■□□ 2
NPHP3-202ENST00000383282 SORCS1Q8WY21 1168 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 DNASE2BQ8WZ79 361 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 TMA16Q96EY4 203 aaKnown RBP27.56■■■□□ 2
NPHP3-202ENST00000383282 NUP58Q9BVL2 599 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 ZMIZ1Q9ULJ6 1067 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 NEUROG3Q9Y4Z2 214 aa27.56■■■□□ 2
NPHP3-202ENST00000383282 YJEFN3A6XGL0 299 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 KCNJ18B7U540 433 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 E7ENQ6 273 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 HYAL3O43820 417 aaPredicted RBP27.55■■■□□ 2
NPHP3-202ENST00000383282 PAEPP09466 180 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 LCP1P13796 627 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 CD59P13987 128 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 COPAP53621 1224 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 CETN1Q12798 172 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 ADGRF1Q5T601 910 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 TMEM270Q6UE05 265 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 RBBP8NLQ8NC74 664 aaPredicted RBP27.55■■■□□ 2
NPHP3-202ENST00000383282 SPATA20Q8TB22 786 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 NT5C1BQ96P26 610 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 MIR1-1HGQ9H1L0 117 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 STOML2Q9UJZ1 356 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 PLA2G4CQ9UP65 541 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 PCDH15Q96QU1 1955 aa27.55■■■□□ 2
NPHP3-202ENST00000383282 FMO5P49326 533 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 DAOAP59103 153 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 NUCB2P80303 420 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 GRIK2Q13002 908 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 FNDC3BQ53EP0 1204 aaKnown RBP27.54■■■□□ 2
NPHP3-202ENST00000383282 DCAF12L1Q5VU92 463 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 TMEM215Q68D42 235 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 LCLAT1Q6UWP7 414 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 CACUL1Q86Y37 369 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 UBR7Q8N806 425 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 OR2T3Q8NH03 318 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 GOLGA1Q92805 767 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 ERCC4Q92889 916 aaPredicted RBP27.54■■■□□ 2
NPHP3-202ENST00000383282 TMEM121BQ9BXQ6 578 aaPredicted RBP27.54■■■□□ 2
NPHP3-202ENST00000383282 PCDHB9Q9Y5E1 797 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 PCDHB4Q9Y5E5 795 aa27.54■■■□□ 2
NPHP3-202ENST00000383282 IGLV3-19P01714 112 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 HLA-FP30511 346 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 PPP1R2P41236 205 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 STILQ15468 1287 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 CCDC40Q4G0X9 1142 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 PKDCCQ504Y2 493 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 CHST9Q7L1S5 443 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 AHI1Q8N157 1196 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 ZCCHC9Q8N567 271 aaKnown RBP27.53■■■□□ 2
NPHP3-202ENST00000383282 ENGASEQ8NFI3 743 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 GATA6Q92908 595 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 CEP63Q96MT8 703 aa27.53■■■□□ 2
NPHP3-202ENST00000383282 TIGD1Q96MW7 591 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms