RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 TALDO1P37837 337 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 ETFBP38117 255 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 IL5RAQ01344 420 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 CNTN1Q12860 1018 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 ELAVL2Q12926 359 aaKnown RBP14.34□□□□□ -0.11
SNPH-201ENST00000381867 PRMT9Q6P2P2 845 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 STRA8Q7Z7C7 330 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 TMEM237Q96Q45 408 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 MYLK2Q9H1R3 596 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 CYP3A43Q9HB55 503 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 CHST12Q9NRB3 414 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 COMMD8Q9NX08 183 aa14.34□□□□□ -0.11
SNPH-201ENST00000381867 DUOX1Q9NRD9 1551 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 FRMPD4Q14CM0 1322 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 GLTPD2A6NH11 291 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 SASH3O75995 380 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 NCAM1P13591 858 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 ELF3P78545 371 aaPredicted RBP14.33□□□□□ -0.11
SNPH-201ENST00000381867 NOGQ13253 232 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 AGKQ53H12 422 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 WDR49Q8IV35 697 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 PRCCQ92733 491 aaPredicted RBP14.33□□□□□ -0.11
SNPH-201ENST00000381867 ZNF184Q99676 751 aaPredicted RBP14.33□□□□□ -0.11
SNPH-201ENST00000381867 KRCC1Q9NPI7 259 aaPredicted RBP14.33□□□□□ -0.11
SNPH-201ENST00000381867 STARD7Q9NQZ5 370 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 CACNA2D2Q9NY47 1150 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 SHOC2Q9UQ13 582 aa14.33□□□□□ -0.11
SNPH-201ENST00000381867 CAPZA2P47755 286 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 C1DQ13901 141 aaKnown RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 ZNF720Q7Z2F6 126 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 HOMEZQ8IX15 550 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 DCUN1D5Q9BTE7 237 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 CEP44Q9C0F1 390 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 RAD21L1Q9H4I0 556 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 A1CFQ9NQ94 594 aaKnown RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 NMRK1Q9NWW6 199 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 ETAA1Q9NY74 926 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 CRLS1Q9UJA2 301 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 STX7O15400 261 aaKnown RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 VPS26AO75436 327 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 TPP2P29144 1249 aaPredicted RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 RGMBQ6NW40 437 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 ST13P5Q8NFI4 369 aaPredicted RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 TMEM169Q96HH4 297 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 TMEM121Q9BTD3 319 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 FANCEQ9HB96 536 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 CYLDQ9NQC7 956 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 DPP3Q9NY33 737 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 ACOT9Q9Y305 439 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 RAD54BQ9Y620 910 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 MZF1P28698 734 aaPredicted RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 NUP62P37198 522 aaPredicted RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 CCT8P50990 548 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 DMPKQ09013 629 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 ZPBP2Q6X784 338 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 ZNF483Q8TF39 744 aaPredicted RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 SRPK1Q96SB4 655 aaKnown RBP14.33□□□□□ -0.12
SNPH-201ENST00000381867 ZNF518BQ9C0D4 1074 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 PCDH9Q9HC56 1237 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 CYP4F12Q9HCS2 524 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 KANSL3Q9P2N6 904 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 MCM8Q9UJA3 840 aa14.33□□□□□ -0.12
SNPH-201ENST00000381867 CLOCKO15516 846 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 FAM20BO75063 409 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 SERPINE1P05121 402 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 ANXA11P50995 505 aaKnown RBP14.32□□□□□ -0.12
SNPH-201ENST00000381867 ALDH6A1Q02252 535 aaKnown RBP14.32□□□□□ -0.12
SNPH-201ENST00000381867 XRCC4Q13426 336 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 OTOP1Q7RTM1 612 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 CROCCP3Q8IVE0 287 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.32□□□□□ -0.12
SNPH-201ENST00000381867 OR6Y1Q8NGX8 325 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
SNPH-201ENST00000381867 GDF3Q9NR23 364 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 KCPQ6ZWJ8 1503 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 ZNF682O95780 498 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 HSMCR30P0CW71 290 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 SLC1A6P48664 564 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 SPDYCQ5MJ68 293 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 FAM45BPQ6NSW5 357 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 FOXR1Q6PIV2 292 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 ATG16L2Q8NAA4 619 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 LRRN4CLQ8ND94 238 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 REPS2Q8NFH8 660 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 APOPT1Q96IL0 206 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 SLITRK1Q96PX8 696 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 PEX1O43933 1283 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 DCTN2Q13561 401 aaKnown RBP14.32□□□□□ -0.12
SNPH-201ENST00000381867 ACVR2BQ13705 512 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 FAM98BQ52LJ0 330 aaKnown RBP14.32□□□□□ -0.12
SNPH-201ENST00000381867 TCHHL1Q5QJ38 904 aaPredicted RBP14.32□□□□□ -0.12
SNPH-201ENST00000381867 KRT78Q8N1N4 520 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 DPF3Q92784 378 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 OLFM1Q99784 485 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 BDH2Q9BUT1 245 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 INTS13Q9NVM9 706 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 RABGEF1Q9UJ41 708 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 ITGB1BP2Q9UKP3 347 aa14.32□□□□□ -0.12
SNPH-201ENST00000381867 MPOP05164 745 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms