RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RTL10Q7L3V2 364 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 CPLX4Q7Z7G2 160 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 METTL23Q86XA0 190 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RNF169Q8NCN4 708 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 UHMK1Q8TAS1 419 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 PRCCQ92733 491 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 HNRNPABQ99729 332 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SELENOSQ9BQE4 189 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 PNPLA8Q9NP80 782 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 FGFR1OP2Q9NVK5 253 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 CYTH4Q9UIA0 394 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 INPP5FQ9Y2H2 1132 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 IRAK3Q9Y616 596 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 FAM155BO75949 473 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 B3GAT3O94766 335 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 UBOX5O94941 541 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 ITGAVP06756 1048 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 SKIV2L2P42285 1042 aaKnown RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 NDST1P52848 882 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 GPX6P59796 221 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 DSG1Q02413 1049 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 FASTKD3Q14CZ7 662 aaKnown RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 PDE12Q6L8Q7 609 aaKnown RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 FUT10Q6P4F1 479 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 KCNT2Q6UVM3 1135 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 OTOP2Q7RTS6 562 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 OSTM1Q86WC4 334 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 FEZF2Q8TBJ5 459 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 ELAC2Q9BQ52 826 aaKnown RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 TACO1Q9BSH4 297 aaKnown RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 RXFP1Q9HBX9 757 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 SSU72Q9NP77 194 aaKnown RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 GEMIN8Q9NWZ8 242 aaKnown RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 DNPEPQ9ULA0 475 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 DNAH12Q6ZR08 3092 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 TCP11X1B4DZS4 312 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 GNA15P30679 374 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 GNL1P36915 607 aaPredicted RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 GABRB2P47870 512 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 PPP1R7Q15435 360 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 ATP13A4Q4VNC1 1196 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 INTS6LQ5JSJ4 861 aaKnown RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 SPDYAQ5MJ70 313 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 IZUMO3Q5VZ72 239 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM270Q6UE05 265 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 DSTYKQ6XUX3 929 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 ANKS3Q6ZW76 656 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 FIBCD1Q8N539 461 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 BCL7CQ8WUZ0 217 aaPredicted RBP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 FUBP3Q96I24 572 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDKL5-202ENST00000379996 VN1R3Q9BXE9 311 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 CSNK1G1Q9HCP0 422 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 COMMD8Q9NX08 183 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 SPG21Q9NZD8 308 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 MTRRQ9UBK8 725 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 SCINQ9Y6U3 715 aa8.02□□□□□ -1.13
CDKL5-202ENST00000379996 CFAP73A6NFT4 308 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 CDH16O75309 829 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 DKK1O94907 266 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ITGB1P05556 798 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 KRT5P13647 590 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ATF2P15336 505 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 NSFP46459 744 aaKnown RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 OR1G1P47890 313 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ALDH7A1P49419 539 aaKnown RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ARSEP51690 589 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 CCNG1P51959 295 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 CALCOCO2Q13137 446 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 BTG3Q14201 252 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ELOAQ14241 798 aaKnown RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 STAT4Q14765 748 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 LRRC14Q15048 493 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 SLC8B1Q6J4K2 584 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 MFSD7Q6UXD7 560 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ARCQ7LC44 396 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 POLNQ7Z5Q5 900 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 THEM5Q8N1Q8 247 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM130Q8N3G9 435 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ZNF606Q8WXB4 792 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 TWNKQ96RR1 684 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 YME1L1Q96TA2 773 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 C11orf70Q9BRQ4 267 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 SNX25Q9H3E2 840 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 NXF1Q9UBU9 619 aaKnown RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 TLDC2A0PJX2 215 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ALOX15BO15296 676 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 TADA2AO75478 443 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ENDOD1O94919 500 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 POU2F2P09086 479 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 WEE2P0C1S8 567 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 CD58P19256 250 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 MAGEA11P43364 429 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ERVK-21P61565 698 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 KCNJ2P63252 427 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 SNCBQ16143 134 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 USP41Q3LFD5 358 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 EFHC2Q5JST6 749 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 KIAA0319Q5VV43 1072 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms