RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CYP2C8P10632 490 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 RAD23AP54725 363 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 PYHIN1Q6K0P9 492 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 PAGE2Q7Z2X7 111 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 SLC30A5Q8TAD4 765 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 APBB2Q92870 758 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 C17orf75Q9HAS0 396 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 SPATA9Q9BWV2 254 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 TAF6P49848 677 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 PRR5LQ6MZQ0 368 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CEP68Q76N32 757 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 GANQ9H2C0 597 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 KLC4Q9NSK0 619 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 BTBD3Q9Y2F9 522 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 LOXHD1Q8IVV2 1947 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CSF1RP07333 972 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 TRAP1Q12931 704 aaKnown RBP11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 TXNRD1Q16881 649 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 TMEM94Q12767 1356 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 URADA6NGE7 173 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 FAM20BO75063 409 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 RTN3O95197 1032 aaPredicted RBP11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 ALKBH2Q6NS38 261 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 FKBP14Q9NWM8 211 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CNOT1A5YKK6 2376 aaKnown RBP11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 LINC00854A0A1B0GVQ3 168 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 GTPBP1O00178 669 aaKnown RBP11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CNTFP26441 200 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 RAB27AP51159 221 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 ADRM1Q16186 407 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 MRPL9Q9BYD2 267 aaKnown RBP11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 RNPEPQ9H4A4 650 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 TMCO1Q9UM00 188 aa11.5□□□□□ -0.57
PTCHD1-201ENST00000379361 CHD1O14646 1710 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ATP9AO75110 1047 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 COLGALT2Q8IYK4 626 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CCDC54Q8NEL0 328 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 E2F8A0AVK6 867 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 SLC9A3R1O14745 358 aaPredicted RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 PGM3O95394 542 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ACLYP53396 1101 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 PTSQ03393 145 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CCNJLQ8IV13 435 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CYP4X1Q8N118 509 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 AMACRQ9UHK6 382 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 TP53BP1Q12888 1972 aaPredicted RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 SGTAO43765 313 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 F9P00740 461 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 IFNA16P05015 189 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ATP5F1P24539 256 aaPredicted RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 FMO5P49326 533 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ABCG4Q9H172 646 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 RSPH9Q9H1X1 276 aaPredicted RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 RCOR1Q9UKL0 485 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 MAPRE3Q9UPY8 281 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 GYS1P13807 737 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 GALNT18Q6P9A2 607 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ZFP28Q8NHY6 868 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 DDX47Q9H0S4 455 aaKnown RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 SPG21Q9NZD8 308 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ADCY6O43306 1168 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 MZT2AQ6P582 158 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 FAM129BQ96TA1 746 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CGRRF1Q99675 332 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 OSBPL5Q9H0X9 879 aaPredicted RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CEP152O94986 1710 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 IQCMA0A1B0GVH7 501 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 H3BNH8 94 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 HNRNPH1P31943 449 aaKnown RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 BARGINQ6ZT62 677 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ANKRD6Q9Y2G4 727 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 NEDD4P46934 1319 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CPSF4O95639 269 aaKnown RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 SMYD1Q8NB12 490 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 MAPKBP1O60336 1514 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ZMYM2Q9UBW7 1377 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 AMD1P17707 334 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CXCR2P25025 360 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 SPIDRQ14159 915 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 DPY30Q9C005 99 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 KPNA5O15131 536 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 GLRA3O75311 464 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 THRAP10827 490 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 RPS12P25398 132 aaKnown RBP11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 GMFBP60983 142 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 TIMM50Q3ZCQ8 353 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CBWD3Q5JTY5 395 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 KCNT1Q5JUK3 1230 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 CBWD5Q5RIA9 395 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 PANX3Q96QZ0 392 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 NAT9Q9BTE0 207 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 NECTIN3Q9NQS3 549 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 IRAK3Q9Y616 596 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 PTPRKQ15262 1439 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 IDH3BO43837 385 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 OR10H2O60403 315 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 ATG7O95352 703 aa11.49□□□□□ -0.57
PTCHD1-201ENST00000379361 NFE2Q16621 373 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms