RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 THPOP40225 353 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 ELK3P41970 407 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 MAP3K7CLP57077 242 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 CDK16Q00536 496 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 DEUP1Q05D60 604 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 SPARCL1Q14515 664 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 MAPRE1Q15691 268 aaKnown RBP10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 KCNA10Q16322 511 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 LACTB2Q53H82 288 aaPredicted RBP10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 OTUD1Q5VV17 481 aaPredicted RBP10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 LHX8Q68G74 356 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 CCSAPQ6IQ19 270 aaPredicted RBP10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 RGS9BPQ6ZS82 235 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 C10orf67Q8IYJ2 551 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 MGARPQ8TDB4 240 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 TFB1MQ8WVM0 346 aaKnown RBP10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 PAFAH2Q99487 392 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 ACBD6Q9BR61 282 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 ADAM33Q9BZ11 813 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 KDM4CQ9H3R0 1056 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 MIOSQ9NXC5 875 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 PADI3Q9ULW8 664 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 CHMP2BQ9UQN3 213 aa10.83□□□□□ -0.68
POLR2J3-201ENST00000379340 LAMA2P24043 3122 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 MEIS3P2A8K0S8 358 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 M0QYT0 321 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 CAPN9O14815 690 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 PPP1R12AO14974 1030 aaPredicted RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 BANF1O75531 89 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 BEST1O76090 585 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 ASMTLO95671 621 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 MLNP12872 115 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 COL9A1P20849 921 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 CD52P31358 61 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 HCAR3P49019 387 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 GLUD2P49448 558 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 ATXN1P54253 815 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 GBE1Q04446 702 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 GAD2Q05329 585 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 TUSC3Q13454 348 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 SEMA5AQ13591 1074 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 PAFAH1B3Q15102 231 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 PDK1Q15118 436 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 ARL13BQ3SXY8 428 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 INTS6LQ5JSJ4 861 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 HP1BP3Q5SSJ5 553 aaPredicted RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 RNF187Q5TA31 235 aaPredicted RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 KIAA0319Q5VV43 1072 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 KCNT2Q6UVM3 1135 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 CAPN12Q6ZSI9 719 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 BEND5Q7L4P6 421 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 FAM131BQ86XD5 332 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 DENND1AQ8TEH3 1009 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 RNF139Q8WU17 664 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 DCAKDQ8WVC6 231 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 HTR3CQ8WXA8 447 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 MYLIPQ8WY64 445 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 LPPQ93052 612 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 PCED1BQ96HM7 432 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 TGS1Q96RS0 853 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 SMOQ99835 787 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 WDR83Q9BRX9 315 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 ULBP1Q9BZM6 244 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 TTYH1Q9H313 450 aaPredicted RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 AGO3Q9H9G7 860 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 ETNK1Q9HBU6 452 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 CSNK1G1Q9HCP0 422 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 EIF2B3Q9NR50 452 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 ARHGEF4Q9NR80 690 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 TMEM51Q9NW97 253 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 DTLQ9NZJ0 730 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 IKBKGQ9Y6K9 419 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 PATJQ8NI35 1801 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 PRUNE2Q8WUY3 3088 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 A0A0A0MRY4 1105 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 TCP11X1B4DZS4 312 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 KBTBD13C9JR72 458 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 M0QZQ0 153 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 EEF2KO00418 725 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 TM9SF1O15321 606 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 NCAM2O15394 837 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 SNX3O60493 162 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 OPHN1O60890 802 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 FAM155BO75949 473 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 SUN1O94901 812 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 OAS1P00973 400 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 LTFP02788 710 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 GOT1P17174 413 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 TYMPP19971 482 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 AMPD1P23109 780 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 MAGEA3P43357 314 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 YWHAGP61981 247 aaKnown RBP eCLIP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 PPARDQ03181 441 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 SLC10A2Q12908 348 aaPredicted RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 MPP2Q14168 576 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 LPIN1Q14693 890 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 LRRC14Q15048 493 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 PRKD1Q15139 912 aaPredicted RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 TIGD5Q53EQ6 642 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 C9orf50Q5SZB4 431 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms