RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 UTP11Q9Y3A2 253 aaKnown RBP25.44■■□□□ 1.66
ECHDC3-201ENST00000379215 EEF2KO00418 725 aaKnown RBP25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 MSI1O43347 362 aaKnown RBP25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 LIASO43766 372 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 HOXA9P31269 272 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 NR2C2P49116 596 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 SEMA3BQ13214 749 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 BYSLQ13895 437 aaKnown RBP25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 PPM1LQ5SGD2 360 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 PPP2R2DQ66LE6 453 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 BZW1Q7L1Q6 419 aaKnown RBP25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 PCDH19Q8TAB3 1148 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 P3H4Q92791 437 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 NUDT5Q9UKK9 219 aa25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 DRG1Q9Y295 367 aaKnown RBP25.43■■□□□ 1.66
ECHDC3-201ENST00000379215 ZNF638Q14966 1978 aaKnown RBP25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 KCNU1A8MYU2 1149 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 MCF2LO15068 1137 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 FGF19O95750 216 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 SPATA31D3P0C874 917 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 TPI1P60174 286 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 CAMK1Q14012 370 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 NUGGCQ68CJ6 796 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 TTC27Q6P3X3 843 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 SPATA31D4Q6ZUB0 917 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 RFX8Q6ZV50 586 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 PQLC3Q8N755 202 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 ATP6V0D2Q8N8Y2 350 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 ACTL9Q8TC94 416 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 ATG4AQ8WYN0 398 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 CCSER2Q9H7U1 834 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 OR12D3Q9UGF7 316 aa25.42■■□□□ 1.66
ECHDC3-201ENST00000379215 H0YGN5 161 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 TTI1O43156 1089 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 DAPK3O43293 454 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 CREB3O43889 395 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 GOT1P17174 413 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 VCPP55072 806 aaKnown RBP25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 OTUD4Q01804 1114 aaKnown RBP25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 NRG1Q02297 640 aaPredicted RBP25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 BRD3Q15059 726 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 SPRED2Q7Z698 418 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 JAMLQ86YT9 394 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 PYROXD2Q8N2H3 581 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 FCRL2Q96LA5 508 aaPredicted RBP25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 CCDC114Q96M63 670 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 GCNAQ96QF7 691 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 CLUHO75153 1309 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 SLC12A8A0AV02 714 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 IGLV3-27P01718 113 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 ITGAVP06756 1048 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 TNFRSF8P28908 595 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 IRS1P35568 1242 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 PBX2P40425 430 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 SNX1Q13596 522 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 PDZD4Q76G19 769 aaPredicted RBP25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 MIB1Q86YT6 1006 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 UNC45BQ8IWX7 931 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 PLD5Q8N7P1 536 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 SLC35B2Q8TB61 432 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 CCHCR1Q8TD31 782 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 C1orf74Q96LT6 269 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 PNKPQ96T60 521 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 EPC1Q9H2F5 836 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 NKX2-4Q9H2Z4 354 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 SLC28A3Q9HAS3 691 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 ANLNQ9NQW6 1124 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 ARHGEF4Q9NR80 690 aa25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 DMGDHQ9UI17 866 aaKnown RBP25.41■■□□□ 1.66
ECHDC3-201ENST00000379215 CLASP2O75122 1294 aaKnown RBP25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 PAGE1O75459 146 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 ERLIN1O75477 346 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 ZNF189O75820 626 aaPredicted RBP25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 CSPG5O95196 566 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 HNRNPA1P09651 372 aaKnown RBP eCLIP25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 CDC25CP30307 473 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 PTGIRP43119 386 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 COG7P83436 770 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 SLC7A5Q01650 507 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 GUCY2DQ02846 1103 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 DPYSQ14117 519 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 NOMO1Q15155 1222 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 EIF1ADQ8N9N8 165 aaKnown RBP25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 BTN2A3PQ96KV6 586 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 MAN1C1Q9NR34 630 aa25.4■■□□□ 1.66
ECHDC3-201ENST00000379215 GBF1Q92538 1859 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 CCDC151A5D8V7 595 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 ZMYND10O75800 440 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 TBX18O95935 607 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 F11P03951 625 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 PFKLP17858 780 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 PPP1R7Q15435 360 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 LEMD2Q8NC56 503 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 ANKRD7Q92527 254 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 PLD4Q96BZ4 506 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 HAUS1Q96CS2 278 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 GDF3Q9NR23 364 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 ASAH2Q9NR71 780 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 TMPRSS4Q9NRS4 437 aa25.39■■□□□ 1.66
ECHDC3-201ENST00000379215 DNPEPQ9ULA0 475 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms