RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 PCGF5Q86SE9 256 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 NPAS4Q8IUM7 802 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 MAGEC3Q8TD91 643 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 MGARPQ8TDB4 240 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 SLC9A7Q96T83 725 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 GPR62Q9BZJ7 368 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 FOXP3Q9BZS1 431 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 STMN4Q9H169 189 aaPredicted RBP20.1■□□□□ 0.81
SSU72-204ENST00000378726 ABCF3Q9NUQ8 709 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 WBP1LQ9NX94 342 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 RRN3Q9NYV6 651 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 HCSTQ9UBK5 93 aa20.1■□□□□ 0.81
SSU72-204ENST00000378726 ACSL3O95573 720 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 GSTA1P08263 222 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 NRLP54845 237 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 E2F5Q15329 346 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 KYNUQ16719 465 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 SCN4BQ8IWT1 228 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 SCML4Q8N228 414 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 TOX2Q96NM4 488 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 CRISPLD2Q9H0B8 497 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 USP29Q9HBJ7 922 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 WDR6Q9NNW5 1121 aaKnown RBP20.09■□□□□ 0.81
SSU72-204ENST00000378726 DDIT4Q9NX09 232 aa20.09■□□□□ 0.81
SSU72-204ENST00000378726 ABI2Q9NYB9 513 aaPredicted RBP20.09■□□□□ 0.81
SSU72-204ENST00000378726 TBKBP1A7MCY6 615 aa20.08■□□□□ 0.81
SSU72-204ENST00000378726 NDC80O14777 642 aa20.08■□□□□ 0.81
SSU72-204ENST00000378726 PARNO95453 639 aaKnown RBP20.08■□□□□ 0.81
SSU72-204ENST00000378726 ADRA1BP35368 520 aa20.08■□□□□ 0.81
SSU72-204ENST00000378726 SLC11A1P49279 550 aa20.08■□□□□ 0.81
SSU72-204ENST00000378726 CTCFP49711 727 aaPredicted RBP20.08■□□□□ 0.81
SSU72-204ENST00000378726 GBE1Q04446 702 aa20.08■□□□□ 0.81
SSU72-204ENST00000378726 IFRD2Q12894 506 aaPredicted RBP20.08■□□□□ 0.81
SSU72-204ENST00000378726 TAOK1Q7L7X3 1001 aa20.08■□□□□ 0.81
SSU72-204ENST00000378726 PGAP3Q96FM1 320 aaPredicted RBP20.08■□□□□ 0.81
SSU72-204ENST00000378726 RBM15Q96T37 977 aaKnown RBP eCLIP20.08■□□□□ 0.81
SSU72-204ENST00000378726 ROPN1BQ9BZX4 212 aaPredicted RBP20.08■□□□□ 0.81
SSU72-204ENST00000378726 ROPN1Q9HAT0 212 aaPredicted RBP20.08■□□□□ 0.81
SSU72-204ENST00000378726 FOXO6A8MYZ6 492 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 NT5C1B-RDH14C9J2C7 533 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 ATP6V1G2O95670 118 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 TTC4O95801 387 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 F9P00740 461 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 SLC10A2Q12908 348 aaPredicted RBP20.08■□□□□ 0.8
SSU72-204ENST00000378726 NFE2Q16621 373 aaPredicted RBP20.08■□□□□ 0.8
SSU72-204ENST00000378726 CTXN3Q4LDR2 81 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 EFHC2Q5JST6 749 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 TAB3Q8N5C8 712 aaPredicted RBP20.08■□□□□ 0.8
SSU72-204ENST00000378726 CCDC63Q8NA47 563 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 RCOR3Q9P2K3 495 aaPredicted RBP20.08■□□□□ 0.8
SSU72-204ENST00000378726 GGT7Q9UJ14 662 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 FBXW11Q9UKB1 542 aa20.08■□□□□ 0.8
SSU72-204ENST00000378726 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.08■□□□□ 0.8
SSU72-204ENST00000378726 TTC3P53804 2025 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 TNFRSF10BO14763 440 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 KCNN4O15554 427 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 SNX3O60493 162 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 RBL1P28749 1068 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 NR2C2P49116 596 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 SLC5A3P53794 718 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 MRPL58Q14197 206 aaKnown RBP20.07■□□□□ 0.8
SSU72-204ENST00000378726 CEP128Q6ZU80 1094 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 CPT1BQ92523 772 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 B3GALT6Q96L58 329 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 NSRP1Q9H0G5 558 aaKnown RBP20.07■□□□□ 0.8
SSU72-204ENST00000378726 ETNK2Q9NVF9 386 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 MARCH5Q9NX47 278 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 DONSONQ9NYP3 566 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 FARP1Q9Y4F1 1045 aaPredicted RBP20.07■□□□□ 0.8
SSU72-204ENST00000378726 CREB3O43889 395 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 GALTP07902 379 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 AIF1P55008 147 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 RELL1Q8IUW5 271 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 PPIL6Q8IXY8 311 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 RNF139Q8WU17 664 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 LRRN4Q8WUT4 740 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 ARHGEF2Q92974 986 aaKnown RBP20.07■□□□□ 0.8
SSU72-204ENST00000378726 MRPL9Q9BYD2 267 aaKnown RBP20.07■□□□□ 0.8
SSU72-204ENST00000378726 NOD2Q9HC29 1040 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 ANLNQ9NQW6 1124 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 CTNNAL1Q9UBT7 734 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 SHOC2Q9UQ13 582 aa20.07■□□□□ 0.8
SSU72-204ENST00000378726 BCLAF3A2AJT9 711 aaKnown RBP20.06■□□□□ 0.8
SSU72-204ENST00000378726 H3BRJ5 948 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 KIF1CO43896 1103 aaKnown RBP20.06■□□□□ 0.8
SSU72-204ENST00000378726 UPP2O95045 317 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 OAS1P00973 400 aaKnown RBP20.06■□□□□ 0.8
SSU72-204ENST00000378726 PBX3P40426 434 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 MAGEA4P43358 317 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 PSEN1P49768 467 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 NCBP2-AS2Q69YL0 99 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 VSTM1Q6UX27 236 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 TBC1D1Q86TI0 1168 aaPredicted RBP20.06■□□□□ 0.8
SSU72-204ENST00000378726 GIMAP7Q8NHV1 300 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 PRCCQ92733 491 aaPredicted RBP20.06■□□□□ 0.8
SSU72-204ENST00000378726 NTAN1Q96AB6 310 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSU72-204ENST00000378726 C9orf72Q96LT7 481 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 PGLYRP2Q96PD5 576 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 WDCPQ9H6R7 721 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms