RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-202ENST00000378161 UBE2TQ9NPD8 197 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-202ENST00000378161 FAM217BQ9NTX9 383 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-202ENST00000378161 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
NPHP4-202ENST00000378161 A0A087X0T9 212 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 CYP26A1O43174 497 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 ALOX12P18054 663 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 MAPK4P31152 587 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 SLC25A3Q00325 362 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 SEC23AQ15436 765 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 ABCB5Q2M3G0 1257 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 KLHL12Q53G59 568 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 METTL2BQ6P1Q9 378 aaKnown RBP12.09□□□□□ -0.47
NPHP4-202ENST00000378161 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 ZNF354CQ86Y25 554 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 CPXCR1Q8N123 301 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 RFFLQ8WZ73 363 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 CIDECQ96AQ7 238 aaPredicted RBP12.09□□□□□ -0.47
NPHP4-202ENST00000378161 C18orf8Q96DM3 657 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 ZNF696Q9H7X3 374 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 BRD7Q9NPI1 651 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 NUMBLQ9Y6R0 609 aa12.09□□□□□ -0.47
NPHP4-202ENST00000378161 NWD1Q149M9 1564 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 A0A1W2PQ67 120 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 YKT6O15498 198 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 SSX5O60225 188 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 PROCP04070 461 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 C6orf222P0C671 652 aaPredicted RBP12.08□□□□□ -0.48
NPHP4-202ENST00000378161 WEE1P30291 646 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ARL4CP56559 192 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 RUNX1T1Q06455 604 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 DGKDQ16760 1214 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 TNFAIP8L3Q5GJ75 292 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 PXDC1Q5TGL8 231 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 PTCD2Q8WV60 388 aaKnown RBP12.08□□□□□ -0.48
NPHP4-202ENST00000378161 C10orf82Q8WW14 230 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 AKAP1Q92667 903 aaKnown RBP eCLIP12.08□□□□□ -0.48
NPHP4-202ENST00000378161 C7orf26Q96N11 449 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 COG4Q9H9E3 785 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ACTR3BQ9P1U1 418 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ANKMY1Q9P2S6 941 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 SLC7A8Q9UHI5 535 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 PCDHGA11Q9Y5H2 935 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 PCDHGA10Q9Y5H3 936 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ABCB11O95342 1321 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 SEC24AO95486 1093 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 RARBP10826 455 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 DNASE1L3Q13609 305 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 IZUMO3Q5VZ72 239 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 SULT1C3Q6IMI6 304 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 FRMD5Q7Z6J6 570 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ADGRG6Q86SQ4 1221 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 PM20D2Q8IYS1 436 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 DPF3Q92784 378 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ISOC1Q96CN7 298 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ACCSQ96QU6 501 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 C12orf10Q9HB07 376 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 KBTBD4Q9NVX7 518 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ST14Q9Y5Y6 855 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 MYMKA6NI61 221 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 BTN3A3O00478 584 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 NUAK1O60285 661 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 ENO3P13929 434 aaPredicted RBP12.08□□□□□ -0.48
NPHP4-202ENST00000378161 KCNJ1P48048 391 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 XKR9Q5GH70 373 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 FAM102BQ5T8I3 360 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 OTOP3Q7RTS5 596 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 MICU2Q8IYU8 434 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 GIMAP1Q8WWP7 306 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 SYN2Q92777 582 aaPredicted RBP12.08□□□□□ -0.48
NPHP4-202ENST00000378161 VPS39Q96JC1 886 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 FAM20AQ96MK3 541 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 TMEM245Q9H330 911 aa12.08□□□□□ -0.48
NPHP4-202ENST00000378161 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 DYRK3O43781 588 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 APBA3O96018 575 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 CBX5P45973 191 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 STILQ15468 1287 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 RBM20Q5T481 1227 aaKnown RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 SYDE1Q6ZW31 735 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 FAM109AQ8N4B1 249 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 ZSWIM2Q8NEG5 633 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 AFG1LQ8WV93 481 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 APOL6Q9BWW8 343 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 H0YCG3 227 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 DLATP10515 647 aaKnown RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 ATF7P17544 494 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 CFL1P23528 166 aaKnown RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 FOXN2P32314 431 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 CLK1P49759 484 aaKnown RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 ITGA8P53708 1063 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 AQP5P55064 265 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 DPYSQ14117 519 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 ZNF267Q14586 743 aaPredicted RBP12.07□□□□□ -0.48
NPHP4-202ENST00000378161 SYCE2Q6PIF2 218 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 UGT2A3Q6UWM9 527 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 NLRX1Q86UT6 975 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 SLC38A6Q8IZM9 456 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 OR8K3Q8NH51 312 aa12.07□□□□□ -0.48
NPHP4-202ENST00000378161 HM13Q8TCT9 377 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms