RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 PIM1P11309 404 aaPredicted RBP17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 IL4RP24394 825 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 MBTD1Q05BQ5 628 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 MYBPC3Q14896 1274 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 FAM47CQ5HY64 1035 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 PRDM16Q9HAZ2 1276 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 ZC3H7BQ9UGR2 993 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 TNFSF13BQ9Y275 285 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 TTLL3Q9Y4R7 772 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 DICER1Q9UPY3 1922 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 SBF1O95248 1867 aa17.14■□□□□ 0.33
PCDHA1-201ENST00000378133 KRT37O76014 449 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 C1QAP02745 245 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 HMGCRP04035 888 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 PGK2P07205 417 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 APRTP07741 180 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 INHBCP55103 352 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 PDK3Q15120 406 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 FAM183BPQ6ZVS7 135 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 EBF4Q9BQW3 602 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 NDUFA13Q9P0J0 144 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 PAK5Q9P286 719 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 UGT1A9O60656 530 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 SPAG6O75602 509 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 SNRPAP09012 282 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 VDRP11473 427 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 CYP3A5P20815 502 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 MAGEA10P43363 369 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 RGS7P49802 495 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 EPHB1P54762 984 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 USP46P62068 366 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 MRPS5P82675 430 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 TTLL12Q14166 644 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 MAP3K21Q5TCX8 1036 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 APOBEC3FQ8IUX4 373 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 C12orf29Q8N999 325 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 CXorf38Q8TB03 319 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 COPS5Q92905 334 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 C20orf27Q9GZN8 174 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 UGT1A7Q9HAW7 530 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 UGT1A10Q9HAW8 530 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 UGT1A8Q9HAW9 530 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 SIRPGQ9P1W8 387 aa17.13■□□□□ 0.33
PCDHA1-201ENST00000378133 PGM3O95394 542 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 PEX2P28328 305 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 CHN2P52757 468 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 NDST1P52848 882 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 TEX44Q53QW1 395 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 SH3D19Q5HYK7 790 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 CAND1Q86VP6 1230 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 DGCR14Q96DF8 476 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 HPDLQ96IR7 371 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 SPATA33Q96N06 139 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 TRIM56Q9BRZ2 755 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 PLAC1Q9HBJ0 212 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 NGRNQ9NPE2 291 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 HBS1LQ9Y450 684 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 SDR42E2A6NKP2 422 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 HNRNPRO43390 633 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 ATP5BP06576 529 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 FAM200BP0CF97 657 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 YBX3P16989 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 AOC1P19801 751 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 BCAR1P56945 870 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 IGBP1P78318 339 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 XIAPP98170 497 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 CDK18Q07002 472 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 BMPR2Q13873 1038 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 RALGPS1Q5JS13 557 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 CELF3Q5SZQ8 465 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 PLPPR4Q7Z2D5 763 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 POPDC2Q9HBU9 364 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 PNPLA8Q9NP80 782 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 SMYD2Q9NRG4 433 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 TSPAN16Q9UKR8 245 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 DEUP1Q05D60 604 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 TRIP10Q15642 601 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 CCDC14Q49A88 953 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 LGSNQ5TDP6 509 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 MAP7D3Q8IWC1 876 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 EXOC8Q8IYI6 725 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 PQLC3Q8N755 202 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 HIPK4Q8NE63 616 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 PIP4K2CQ8TBX8 421 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 LENG1Q96BZ8 264 aaPredicted RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 CPB2Q96IY4 423 aa17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 DNAAF2Q9NVR5 837 aaKnown RBP17.12■□□□□ 0.33
PCDHA1-201ENST00000378133 ATP9BO43861 1147 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 ZBED1O96006 694 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 ITGA2BP08514 1039 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 OSBPP22059 807 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 SERPINB6P35237 376 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 RGS2P41220 211 aa17.11■□□□□ 0.33
PCDHA1-201ENST00000378133 CCNIQ14094 377 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms