RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ARCQ7LC44 396 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 MAP7D3Q8IWC1 876 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 ZBTB8OSQ8IWT0 167 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 NIM1KQ8IY84 436 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 AGR3Q8TD06 166 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 TFB1MQ8WVM0 346 aaKnown RBP18.56■□□□□ 0.56
GNE-201ENST00000377902 RNPEPQ9H4A4 650 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 RPF1Q9H9Y2 349 aaKnown RBP18.56■□□□□ 0.56
GNE-201ENST00000377902 ADAMTS5Q9UNA0 930 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 TRIP11Q15643 1979 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 ZBTB42B2RXF5 422 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 RAG1P15918 1043 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 VCLP18206 1134 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 PTPRAP18433 802 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 PROZP22891 400 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 USP4Q13107 963 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 CUL3Q13618 768 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 HNRNPDQ14103 355 aaKnown RBP18.56■□□□□ 0.56
GNE-201ENST00000377902 TRIP10Q15642 601 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 TBCCQ15814 346 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 SLC9A4Q6AI14 798 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 PMF1Q6P1K2 205 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 ACAD11Q709F0 780 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 MARK2Q7KZI7 788 aaKnown RBP18.56■□□□□ 0.56
GNE-201ENST00000377902 CLMNQ96JQ2 1002 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 PDGFDQ9GZP0 370 aaPredicted RBP18.56■□□□□ 0.56
GNE-201ENST00000377902 CDT1Q9H211 546 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 MOCS1Q9NZB8 636 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 PCDHGB4Q9UN71 923 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 POMPQ9Y244 141 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 PCDHGB5Q9Y5G0 923 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 LCTP09848 1927 aa18.56■□□□□ 0.56
GNE-201ENST00000377902 CYP2F1P24903 491 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 SESN2P58004 480 aaPredicted RBP18.55■□□□□ 0.56
GNE-201ENST00000377902 MED21Q13503 144 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 SURF1Q15526 300 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 WRNIP1Q96S55 665 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 LPIN3Q9BQK8 851 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 KLHL4Q9C0H6 718 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 MIS12Q9H081 205 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 XPNPEP3Q9NQH7 507 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 TMEM216Q9P0N5 145 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 ANK1P16157 1881 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 DCXO43602 365 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 PLIN3O60664 434 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 PGM3O95394 542 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 ITGAXP20702 1163 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 TGM2P21980 687 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 MAGEA6P43360 314 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 PDPK2PQ6A1A2 396 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 KCNT2Q6UVM3 1135 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 TSHZ1Q6ZSZ6 1077 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 ILDR2Q71H61 639 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 TNS4Q8IZW8 715 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 ATXN7L3BQ96GX2 97 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 NRDE2Q9H7Z3 1164 aa18.55■□□□□ 0.56
GNE-201ENST00000377902 DMAP1Q9NPF5 467 aaPredicted RBP18.55■□□□□ 0.56
GNE-201ENST00000377902 CCNT2O60583 730 aaKnown RBP18.54■□□□□ 0.56
GNE-201ENST00000377902 UQCRBP14927 111 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 ICAM3P32942 547 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 CLCN3P51790 818 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 OLIG2Q13516 323 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 HSDL1Q3SXM5 330 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 IER5Q5VY09 327 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 PGM2L1Q6PCE3 622 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 AAGABQ6PD74 315 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 RTKN2Q8IZC4 609 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 MCUQ8NE86 351 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 CXorf38Q8TB03 319 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 RAB3IL1Q8TBN0 382 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 KHSRPQ92945 711 aaKnown RBP eCLIP18.54■□□□□ 0.56
GNE-201ENST00000377902 GCNAQ96QF7 691 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 R3HDMLQ9H3Y0 253 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 ZNF195O14628 629 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 MSX2P35548 267 aaPredicted RBP18.54■□□□□ 0.56
GNE-201ENST00000377902 GTF2A2P52657 109 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 HDAC4P56524 1084 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 CDK18Q07002 472 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 ITGA9Q13797 1035 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 MMEL1Q495T6 779 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 PACS1Q6VY07 963 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 ST13P4Q8IZP2 240 aaPredicted RBP18.54■□□□□ 0.56
GNE-201ENST00000377902 CLEC4CQ8WTT0 213 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 PGBD4Q96DM1 585 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 PPP1R36Q96LQ0 422 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 NDNQ99608 321 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 CENPKQ9BS16 269 aa18.54■□□□□ 0.56
GNE-201ENST00000377902 FRMD8Q9BZ67 464 aaPredicted RBP18.54■□□□□ 0.56
GNE-201ENST00000377902 E9PBE3 544 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 ZBTB14O43829 449 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 KLHL41O60662 606 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 GABBR2O75899 941 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 PDK2Q15119 407 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 ARMC3Q5W041 872 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 CMC1Q7Z7K0 106 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 LRRC39Q96DD0 335 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 DHX35Q9H5Z1 703 aaKnown RBP18.53■□□□□ 0.56
GNE-201ENST00000377902 FAM49BQ9NUQ9 324 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 CLIC5Q9NZA1 410 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 TBC1D30Q9Y2I9 924 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms