RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MSRB2Q9Y3D2 182 aa20.06■□□□□ 0.8
CBWD3-204ENST00000377349 FAM221BA6H8Z2 402 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 ZBTB24O43167 697 aaPredicted RBP20.05■□□□□ 0.8
CBWD3-204ENST00000377349 HMBSP08397 361 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 MAOBP27338 520 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 CD6P30203 668 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 YWHAEP62258 255 aaKnown RBP20.05■□□□□ 0.8
CBWD3-204ENST00000377349 TMEM215Q68D42 235 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 ARHGAP17Q68EM7 881 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 RSRC2Q7L4I2 434 aaKnown RBP20.05■□□□□ 0.8
CBWD3-204ENST00000377349 PIGZQ86VD9 579 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 ZC3H3Q8IXZ2 948 aaKnown RBP20.05■□□□□ 0.8
CBWD3-204ENST00000377349 DNASE2BQ8WZ79 361 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 FAXDC2Q96IV6 333 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 CAMK1GQ96NX5 476 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 CDK5RAP1Q96SZ6 601 aaKnown RBP20.05■□□□□ 0.8
CBWD3-204ENST00000377349 UBXN6Q9BZV1 441 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 PRDM16Q9HAZ2 1276 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 METTL14Q9HCE5 456 aaKnown RBP20.05■□□□□ 0.8
CBWD3-204ENST00000377349 KNTC1P50748 2209 aa20.05■□□□□ 0.8
CBWD3-204ENST00000377349 SRRM3A6NNA2 597 aaPredicted RBP20.04■□□□□ 0.8
CBWD3-204ENST00000377349 TULP2O00295 520 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 NDUFS2O75306 463 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 SYPP08247 313 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 CHKAP35790 457 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 FMO5P49326 533 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 PLEKHG6Q3KR16 790 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 CREBRFQ8IUR6 639 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 DENND1CQ8IV53 801 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 CPXM2Q8N436 756 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 TOE1Q96GM8 510 aaKnown RBP20.04■□□□□ 0.8
CBWD3-204ENST00000377349 DCLK3Q9C098 648 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 FAM124BQ9H5Z6 455 aaPredicted RBP20.04■□□□□ 0.8
CBWD3-204ENST00000377349 ITM2CQ9NQX7 267 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 MARCH2Q9P0N8 246 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 HESX1Q9UBX0 185 aa20.04■□□□□ 0.8
CBWD3-204ENST00000377349 NYNRINQ9P2P1 1898 aaKnown RBP20.04■□□□□ 0.8
CBWD3-204ENST00000377349 BICDL2A1A5D9 508 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 PPP1R2P41236 205 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 COPAP53621 1224 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 ZNF234Q14588 700 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 CAMK4Q16566 473 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 SGO2Q562F6 1265 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 PM20D1Q6GTS8 502 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 RAB44Q7Z6P3 723 aaPredicted RBP20.03■□□□□ 0.8
CBWD3-204ENST00000377349 RGL4Q8IZJ4 473 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 PPM1KQ8N3J5 372 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 ZCCHC14Q8WYQ9 949 aaKnown RBP20.03■□□□□ 0.8
CBWD3-204ENST00000377349 NDRG1Q92597 394 aaKnown RBP20.03■□□□□ 0.8
CBWD3-204ENST00000377349 FOXJ1Q92949 421 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 CEP63Q96MT8 703 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 TSPAN16Q9UKR8 245 aa20.03■□□□□ 0.8
CBWD3-204ENST00000377349 ADAMTS20P59510 1910 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 NPC1O15118 1278 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 SH3BP5O60239 455 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 IGLV3-19P01714 112 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 CAPNS1P04632 268 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 PRKCHP24723 683 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 TPMTP51580 245 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 TKTL1P51854 596 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 ZNF132P52740 706 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 YWHAGP61981 247 aaKnown RBP eCLIP20.02■□□□□ 0.8
CBWD3-204ENST00000377349 CETN1Q12798 172 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 GRIK2Q13002 908 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 PAK1Q13153 545 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 SLC14A1Q13336 389 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 STARD3Q14849 445 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 ANKS1BQ7Z6G8 1248 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 CHCHD4Q8N4Q1 142 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 ANKRD52Q8NB46 1076 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 UBA3Q8TBC4 463 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 SORCS1Q8WY21 1168 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 NT5C1BQ96P26 610 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 ELOVL2Q9NXB9 296 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 SUSD2Q9UGT4 822 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 NFE2L3Q9Y4A8 694 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 PCDHB4Q9Y5E5 795 aa20.02■□□□□ 0.8
CBWD3-204ENST00000377349 SLC12A8A0AV02 714 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 PPP1R3GB7ZBB8 358 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 BMP6P22004 513 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 TBXAS1P24557 533 aaPredicted RBP20.02■□□□□ 0.79
CBWD3-204ENST00000377349 BNC1Q01954 994 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 MORC3Q14149 939 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 TRIP4Q15650 581 aaPredicted RBP20.02■□□□□ 0.79
CBWD3-204ENST00000377349 WDR45BQ5MNZ6 344 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 SYCP2LQ5T4T6 812 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 TTI2Q6NXR4 508 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 TMEM270Q6UE05 265 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 TMPRSS6Q8IU80 811 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 ARHGAP18Q8N392 663 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 IPO9Q96P70 1041 aaKnown RBP20.02■□□□□ 0.79
CBWD3-204ENST00000377349 GPR174Q9BXC1 333 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 ULBP1Q9BZM6 244 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 LRRC4Q9HBW1 653 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 COQ4Q9Y3A0 265 aa20.02■□□□□ 0.79
CBWD3-204ENST00000377349 SMG1Q96Q15 3661 aaKnown RBP20.01■□□□□ 0.79
CBWD3-204ENST00000377349 PLXNA2O75051 1894 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 H0Y626 953 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 TRIM16O95361 564 aa20.01■□□□□ 0.79
CBWD3-204ENST00000377349 ZBED1O96006 694 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms