RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 BTBD10Q9BSF8 475 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 RASSF1Q9NS23 344 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 MAGEB2O15479 319 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 SASH1O94885 1247 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 ATF6P18850 670 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 S100A2P29034 98 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 PREPLQ4J6C6 727 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-205ENST00000376636 SCAIQ8N9R8 606 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 KLHL32Q96NJ5 620 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 FLT1P17948 1338 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 TCEA3O75764 348 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 ITGALP20701 1170 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 PIK3CGP48736 1102 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 POLNQ7Z5Q5 900 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 IQCF2Q8IXL9 164 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 DHRSXQ8N5I4 330 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 DGCR6LQ9BY27 220 aa11.91□□□□□ -0.5
VPS13A-205ENST00000376636 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 METTL21EPA6NDL7 271 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 RGS14O43566 566 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ZNF177Q13360 481 aaPredicted RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 FRG1Q14331 258 aaKnown RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 TCHHL1Q5QJ38 904 aaPredicted RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ADGRF4Q8IZF3 695 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 OR2W6PQ8NHA6 318 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 HOXB6P17509 224 aaKnown RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 OVGP1Q12889 678 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 FAM126BQ8IXS8 530 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 DEPDC4Q8N2C3 294 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 A0A1W2PQ72 361 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 COMTP21964 271 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 GTF2H1P32780 548 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 OMPP47874 163 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 PRKAA1Q13131 559 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 MARK2Q7KZI7 788 aaKnown RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 MARK1Q9P0L2 795 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 NME5P56597 212 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 R3HCC1LQ7Z5L2 792 aaKnown RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ZCCHC2Q9C0B9 1178 aaKnown RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ACTR8Q9H981 624 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 RPS6KA6Q9UK32 745 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 RGS1Q08116 209 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 FEZF2Q8TBJ5 459 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ITCHQ96J02 903 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 SPATA5L1Q9BVQ7 753 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 DPY30Q9C005 99 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 MLXQ9UH92 298 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 LYVE1Q9Y5Y7 322 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 MYH15Q9Y2K3 1946 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 IQCMA0A1B0GVH7 501 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 USP17L10C9JJH3 530 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 RAG1P15918 1043 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ITGA2P17301 1181 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 SLC1A6P48664 564 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ALDH9A1P49189 494 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 INTS11Q5TA45 600 aaKnown RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 CYP20A1Q6UW02 462 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 FAM20CQ8IXL6 584 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ANKRD7Q92527 254 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 LRRC4BQ9NT99 713 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 THAP1Q9NVV9 213 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 L1RE1Q9UN81 338 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 RBM7Q9Y580 266 aaKnown RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 SAGE2PA6NJ88 616 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 F5H5T6 163 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 KMOO15229 486 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 PRKAB2O43741 272 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 ASS1P00966 412 aaKnown RBP11.9□□□□□ -0.5
VPS13A-205ENST00000376636 AIFM2Q9BRQ8 373 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 SLC24A2Q9UI40 661 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 VANGL2Q9ULK5 521 aa11.9□□□□□ -0.5
VPS13A-205ENST00000376636 CES2O00748 559 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 ANKS1AQ92625 1134 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 TRIM10Q9UDY6 481 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 CDH9Q9ULB4 789 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 ENTPD4Q9Y227 616 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 TMCC2O75069 709 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 GRAP2O75791 330 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 NPY2RP49146 381 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 PRDM8Q9NQV8 689 aa11.9□□□□□ -0.51
VPS13A-205ENST00000376636 KDM5CP41229 1560 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 KCNH1O95259 989 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 PGK1P00558 417 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 FASTKQ14296 549 aaKnown RBP11.89□□□□□ -0.51
VPS13A-205ENST00000376636 NECTIN1Q15223 517 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 SLC15A2Q16348 729 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 CBWD2Q8IUF1 395 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 SYNPO2Q9UMS6 1093 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 LOC102724428A0A0B4J2F2 783 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 GAS2O43903 313 aaKnown RBP11.89□□□□□ -0.51
VPS13A-205ENST00000376636 SIK1P57059 783 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 GOLGA7BQ2TAP0 167 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 MAGEE2Q8TD90 523 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-205ENST00000376636 KLF6Q99612 283 aaPredicted RBP11.89□□□□□ -0.51
VPS13A-205ENST00000376636 PIF1Q9H611 641 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 PNPLA8Q9NP80 782 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 TIMMDC1Q9NPL8 285 aa11.89□□□□□ -0.51
VPS13A-205ENST00000376636 AAASQ9NRG9 546 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms