RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ANKRD40Q6AI12 368 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 CLEC20AQ6ZU45 233 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 FAM124AQ86V42 546 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 TMPRSS6Q8IU80 811 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 ZC3H3Q8IXZ2 948 aaKnown RBP13.78□□□□□ -0.2
CLCN6-205ENST00000376492 SORCS1Q8WY21 1168 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 SIPA1Q96FS4 1042 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 TSG101Q99816 390 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLCN6-205ENST00000376492 KIAA1522Q9P206 1035 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-205ENST00000376492 THAP10Q9P2Z0 257 aaPredicted RBP13.78□□□□□ -0.2
CLCN6-205ENST00000376492 DNMT3LQ9UJW3 386 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 NFE2L3Q9Y4A8 694 aa13.78□□□□□ -0.2
CLCN6-205ENST00000376492 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 PSMA7O14818 248 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 PENKP01210 267 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-205ENST00000376492 FAM200BP0CF97 657 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 ZNF883P0CG24 379 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
CLCN6-205ENST00000376492 ACO1P21399 889 aaKnown RBP13.77□□□□□ -0.21
CLCN6-205ENST00000376492 ASPAP45381 313 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 PMS1P54277 932 aaKnown RBP13.77□□□□□ -0.21
CLCN6-205ENST00000376492 FKBP3Q00688 224 aaKnown RBP13.77□□□□□ -0.21
CLCN6-205ENST00000376492 LRRC63Q05C16 580 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 CYP4F3Q08477 520 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 STIM1Q13586 685 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 ENPP2Q13822 863 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 ZNF234Q14588 700 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 ZACNQ401N2 412 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 ISM2Q6H9L7 571 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 SPOPLQ6IQ16 392 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 KLHDC10Q6PID8 442 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 FOXR2Q6PJQ5 311 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 LAYNQ6UX15 382 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 SV2AQ7L0J3 742 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 SCD5Q86SK9 330 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 FAM186BQ8IYM0 893 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 CRYBG2Q8N1P7 616 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 C1orf216Q8TAB5 229 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 RHBDD1Q8TEB9 315 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 SNX19Q92543 992 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 PRCCQ92733 491 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-205ENST00000376492 TWNKQ96RR1 684 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 SCUBE2Q9NQ36 999 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 KIAA1468Q9P260 1216 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 NAGPAQ9UK23 515 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 CLEC4EQ9ULY5 219 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLCN6-205ENST00000376492 SLC27A6Q9Y2P4 619 aa13.77□□□□□ -0.21
CLCN6-205ENST00000376492 TRABD2BA6NFA1 517 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 FLRT2O43155 660 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 SYNCRIPO60506 623 aaKnown RBP13.76□□□□□ -0.21
CLCN6-205ENST00000376492 IGLV3-19P01714 112 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 HMBSP08397 361 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 KRT13P13646 458 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 GTF2H1P32780 548 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 PLA2G4AP47712 749 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 CSNK1EP49674 416 aaKnown RBP13.76□□□□□ -0.21
CLCN6-205ENST00000376492 CAMK4Q16566 473 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 IL27RAQ6UWB1 636 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 DBX2Q6ZNG2 339 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 RBM43Q6ZSC3 357 aaKnown RBP13.76□□□□□ -0.21
CLCN6-205ENST00000376492 PIWIL1Q96J94 861 aaKnown RBP13.76□□□□□ -0.21
CLCN6-205ENST00000376492 DKK4Q9UBT3 224 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 RASAL2Q9UJF2 1139 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 BPTFQ12830 3046 aa13.76□□□□□ -0.21
CLCN6-205ENST00000376492 BIN1O00499 593 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 SLC16A3O15427 465 aaKnown RBP13.75□□□□□ -0.21
CLCN6-205ENST00000376492 EPB41P11171 864 aaKnown RBP13.75□□□□□ -0.21
CLCN6-205ENST00000376492 ACADMP11310 421 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 HLA-EP13747 358 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 OXTRP30559 389 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 CORO1AP31146 461 aaKnown RBP13.75□□□□□ -0.21
CLCN6-205ENST00000376492 CAMK2BQ13554 666 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 SGSM1Q2NKQ1 1148 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 KIF19Q2TAC6 998 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 CCDC157Q569K6 752 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 TMEM215Q68D42 235 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 ANKS1BQ7Z6G8 1248 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-205ENST00000376492 TAF4BQ92750 862 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 HNRNPABQ99729 332 aaKnown RBP13.75□□□□□ -0.21
CLCN6-205ENST00000376492 CDC6Q99741 560 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 NUP58Q9BVL2 599 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 CIPCQ9C0C6 399 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 CLSTN2Q9H4D0 955 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 C6orf106Q9H6K1 298 aaPredicted RBP13.75□□□□□ -0.21
CLCN6-205ENST00000376492 PCDHGB2Q9Y5G2 931 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 SNX11Q9Y5W9 270 aa13.75□□□□□ -0.21
CLCN6-205ENST00000376492 HELZ2Q9BYK8 2649 aaKnown RBP13.75□□□□□ -0.21
CLCN6-205ENST00000376492 PTPRBP23467 1997 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 TRIM49BA6NDI0 452 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 KCNK3O14649 394 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 NPC1O15118 1278 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 PRB1P04280 392 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 EPHX1P07099 455 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 P4HA1P13674 534 aa13.74□□□□□ -0.21
CLCN6-205ENST00000376492 AFF3P51826 1226 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms