RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SMTNL2Q2TAL5 461 aa23.78■■□□□ 1.4
HLA-C-202ENST00000376237 ATP13A4Q4VNC1 1196 aa23.78■■□□□ 1.4
HLA-C-202ENST00000376237 RCOR2Q8IZ40 523 aa23.78■■□□□ 1.4
HLA-C-202ENST00000376237 SMRP1Q8NCR6 262 aa23.78■■□□□ 1.4
HLA-C-202ENST00000376237 HSPH1Q92598 858 aa23.78■■□□□ 1.4
HLA-C-202ENST00000376237 ALG3Q92685 438 aa23.78■■□□□ 1.4
HLA-C-202ENST00000376237 ZFRQ96KR1 1074 aaKnown RBP23.78■■□□□ 1.4
HLA-C-202ENST00000376237 DCLK3Q9C098 648 aa23.78■■□□□ 1.4
HLA-C-202ENST00000376237 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.78■■□□□ 1.4
HLA-C-202ENST00000376237 SAR1BQ9Y6B6 198 aa23.78■■□□□ 1.4
HLA-C-202ENST00000376237 CES2O00748 559 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 STC2O76061 302 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 HMBSP08397 361 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 MARCKSL1P49006 195 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 DNA2P51530 1060 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 ZNF135P52742 658 aaPredicted RBP23.77■■□□□ 1.4
HLA-C-202ENST00000376237 DPYSL2Q16555 572 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 DNTTIP2Q5QJE6 756 aaKnown RBP23.77■■□□□ 1.4
HLA-C-202ENST00000376237 KCTD6Q8NC69 237 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 ING5Q8WYH8 240 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 PBKQ96KB5 322 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 OSBPL2Q9H1P3 480 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 GKN1Q9NS71 199 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 TDP1Q9NUW8 608 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 CD207Q9UJ71 328 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 ANAPC1Q9H1A4 1944 aa23.77■■□□□ 1.4
HLA-C-202ENST00000376237 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.76■■□□□ 1.39
HLA-C-202ENST00000376237 LATS1O95835 1130 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 KRT1P04264 644 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 KCNQ1P51787 676 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 COPS2P61201 443 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 VSIG1Q86XK7 387 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 NPAS3Q8IXF0 933 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 FGF13Q92913 245 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 C1orf74Q96LT6 269 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 OSBPL9Q96SU4 736 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 DHX35Q9H5Z1 703 aaKnown RBP23.76■■□□□ 1.39
HLA-C-202ENST00000376237 SMPD4Q9NXE4 827 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 LSM7Q9UK45 103 aaKnown RBP23.76■■□□□ 1.39
HLA-C-202ENST00000376237 OBSL1O75147 1896 aa23.76■■□□□ 1.39
HLA-C-202ENST00000376237 TCF3P15923 654 aa23.75■■□□□ 1.39
HLA-C-202ENST00000376237 KDELR1P24390 212 aa23.75■■□□□ 1.39
HLA-C-202ENST00000376237 SLC11A2P49281 568 aa23.75■■□□□ 1.39
HLA-C-202ENST00000376237 FAM71BQ8TC56 605 aa23.75■■□□□ 1.39
HLA-C-202ENST00000376237 KIF9Q9HAQ2 790 aa23.75■■□□□ 1.39
HLA-C-202ENST00000376237 ANLNQ9NQW6 1124 aa23.75■■□□□ 1.39
HLA-C-202ENST00000376237 ZNF510Q9Y2H8 683 aa23.75■■□□□ 1.39
HLA-C-202ENST00000376237 NOTCH4Q99466 2003 aa23.75■■□□□ 1.39
HLA-C-202ENST00000376237 LRRD1A4D1F6 860 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 ZNF487B1APH4 448 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 PAGE1O75459 146 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 L1CAMP32004 1257 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 MLLT6P55198 1093 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 CDH6P55285 790 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 TUBB2AQ13885 445 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 KRT81Q14533 505 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 CBX2Q14781 532 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 CCDC85BQ15834 202 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 GET4Q7L5D6 327 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 ARID3BQ8IVW6 561 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 RAPGEF5Q92565 580 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 PSMB7Q99436 277 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 TUBB2BQ9BVA1 445 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 UBE2ZQ9H832 354 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 RCOR3Q9P2K3 495 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 CDH7Q9ULB5 785 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 ZFP37Q9Y6Q3 630 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 DENND4CQ5VZ89 1909 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 I6L893 689 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 MOCS2O96007 188 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 PYGMP11217 842 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 ARSEP51690 589 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 AMPD2Q01433 879 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 NRG1Q02297 640 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 SKIV2LQ15477 1246 aaKnown RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 SEL1L2Q5TEA6 688 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 HTR3DQ70Z44 454 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 KIAA1958Q8N8K9 716 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 ZSCAN18Q8TBC5 510 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 USP13Q92995 863 aaPredicted RBP23.74■■□□□ 1.39
HLA-C-202ENST00000376237 ZSWIM3Q96MP5 696 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 PCDH18Q9HCL0 1135 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 GPATCH2LQ9NWQ4 482 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 OR12D3Q9UGF7 316 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 CDH22Q9UJ99 828 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 SH3BP1Q9Y3L3 701 aa23.74■■□□□ 1.39
HLA-C-202ENST00000376237 LEFTY2O00292 366 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 ACSL4O60488 711 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 IRF1P10914 325 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 CORO1AP31146 461 aaKnown RBP23.73■■□□□ 1.39
HLA-C-202ENST00000376237 CXCR5P32302 372 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 HTR7P34969 479 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 ARL4AP40617 200 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 ZXDBP98169 803 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 CA9Q16790 459 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 DCAF12L1Q5VU92 463 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 CCDC50Q8IVM0 306 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 CELF5Q8N6W0 485 aaKnown RBP23.73■■□□□ 1.39
HLA-C-202ENST00000376237 ADAMTS19Q8TE59 1207 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 SH3RF2Q8TEC5 729 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms