RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 TREML2Q5T2D2 321 aa13.99□□□□□ -0.17
C9orf47-203ENST00000375851 MFSD14AQ96MC6 490 aa13.99□□□□□ -0.17
C9orf47-203ENST00000375851 TMEM120AQ9BXJ8 343 aa13.99□□□□□ -0.17
C9orf47-203ENST00000375851 SMPD4Q9NXE4 827 aa13.99□□□□□ -0.17
C9orf47-203ENST00000375851 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 USP12O75317 370 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 SMIM10L2AP0DMW4 78 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 SMIM10L2BP0DMW5 78 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 ZNF143P52747 638 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 TMED1Q13445 227 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 RASA2Q15283 850 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 N4BP2L1Q5TBK1 243 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 ABHD15Q6UXT9 468 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 PHF13Q86YI8 300 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 VPS37AQ8NEZ2 397 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 ZNF384Q8TF68 577 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 ZNF333Q96JL9 665 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 ADGRE3Q9BY15 652 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 CCDC134Q9H6E4 229 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 FAM32AQ9Y421 112 aaKnown RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 C5orf58C9J3I9 102 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 PGK1P00558 417 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 CD151P48509 253 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 ITGA9Q13797 1035 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 DDX39BQ13838 428 aaKnown RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 KRT72Q14CN4 511 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 SLC39A12Q504Y0 691 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 GPR142Q7Z601 462 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 PIGZQ86VD9 579 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 HES6Q96HZ4 224 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 PCYOX1Q9UHG3 505 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 DDX20Q9UHI6 824 aaKnown RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 C2CD2Q9Y426 696 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 MRPL42Q9Y6G3 142 aaKnown RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 EVPLLA8MZ36 301 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 HACD1B0YJ81 288 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 FARP2O94887 1054 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 VAPBO95292 243 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 PKN3Q6P5Z2 889 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 TEX9Q8N6V9 391 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 PDGFDQ9GZP0 370 aaPredicted RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 ADNPQ9H2P0 1102 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 FAAP100Q0VG06 881 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 KCNMB4Q86W47 210 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 SRPK1Q96SB4 655 aaKnown RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 UNKQ9C0B0 810 aaKnown RBP13.98□□□□□ -0.17
C9orf47-203ENST00000375851 ZCWPW1Q9H0M4 648 aa13.98□□□□□ -0.17
C9orf47-203ENST00000375851 CASZ1Q86V15 1759 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 E9PBE3 544 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 KLHL41O60662 606 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 ETS1P14921 441 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 NPY2RP49146 381 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 INHBEP58166 350 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 RETSATQ6NUM9 610 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 HMX1Q9NP08 348 aaPredicted RBP13.97□□□□□ -0.17
C9orf47-203ENST00000375851 ZNF446Q9NWS9 450 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 UTP6Q9NYH9 597 aaKnown RBP13.97□□□□□ -0.17
C9orf47-203ENST00000375851 A0A0B4J269 797 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 TPST1O60507 370 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 TRIM16O95361 564 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
C9orf47-203ENST00000375851 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
C9orf47-203ENST00000375851 NPR3P17342 541 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 FAM183BPQ6ZVS7 135 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 ANKS3Q6ZW76 656 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 RNF168Q8IYW5 571 aaPredicted RBP13.97□□□□□ -0.17
C9orf47-203ENST00000375851 VAT1Q99536 393 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 ECSITQ9BQ95 431 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 ATP13A1Q9HD20 1204 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 ENTPD7Q9NQZ7 604 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 SLCO1B7G3V0H7 640 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 PGAM1P18669 254 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 TFE3P19532 575 aaPredicted RBP13.97□□□□□ -0.17
C9orf47-203ENST00000375851 BTKQ06187 659 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 MAP2K5Q13163 448 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 RCN1Q15293 331 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 LBX2Q6XYB7 198 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 TMEM139Q8IV31 216 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 V9GYQ6 96 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 A0A096LPK6 155 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 MYBL2P10244 700 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 CALB2P22676 271 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 AMPD2Q01433 879 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 DAB2IPQ5VWQ8 1189 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 OR9Q1Q8NGQ5 310 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 DACH2Q96NX9 599 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 CDK5RAP1Q96SZ6 601 aaKnown RBP13.97□□□□□ -0.17
C9orf47-203ENST00000375851 PRPF18Q99633 342 aaKnown RBP13.97□□□□□ -0.17
C9orf47-203ENST00000375851 C17orf80Q9BSJ5 609 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 PRKD2Q9BZL6 878 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 LRRC19Q9H756 370 aa13.97□□□□□ -0.17
C9orf47-203ENST00000375851 OPLAHO14841 1288 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 TRUB2O95900 331 aaKnown RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 CDH2P19022 906 aaPredicted RBP13.96□□□□□ -0.17
C9orf47-203ENST00000375851 PLIN5Q00G26 463 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 HERC6Q8IVU3 1022 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 MYO1HQ8N1T3 1032 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 LPCAT1Q8NF37 534 aa13.96□□□□□ -0.17
C9orf47-203ENST00000375851 TEKT4Q8WW24 435 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms