RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 FLRT1Q9NZU1 646 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 ANK1P16157 1881 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 F8VP50 259 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 H3BNX3 289 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 NDC80O14777 642 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 ATP6V1B1P15313 513 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 RPL26P61254 145 aaKnown RBP13.33□□□□□ -0.27
MSH5-204ENST00000375755 MRPS5P82675 430 aaKnown RBP13.33□□□□□ -0.27
MSH5-204ENST00000375755 PLOD1Q02809 727 aaPredicted RBP13.33□□□□□ -0.27
MSH5-204ENST00000375755 ATG16L1Q676U5 607 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 PGM2L1Q6PCE3 622 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 DENND5BQ6ZUT9 1274 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 ZNF677Q86XU0 584 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 MAP7D3Q8IWC1 876 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 MRPL4Q9BYD3 311 aaKnown RBP13.33□□□□□ -0.27
MSH5-204ENST00000375755 SUDS3Q9H7L9 328 aaPredicted RBP13.33□□□□□ -0.27
MSH5-204ENST00000375755 C1orf112Q9NSG2 853 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 ERAP1Q9NZ08 941 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 SIRPGQ9P1W8 387 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 XPO7Q9UIA9 1087 aaKnown RBP13.33□□□□□ -0.27
MSH5-204ENST00000375755 INPP5FQ9Y2H2 1132 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 PLLPQ9Y342 182 aa13.33□□□□□ -0.27
MSH5-204ENST00000375755 MYOCOSA0A1B0GUC4 107 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 CASQ2O14958 399 aaPredicted RBP13.33□□□□□ -0.28
MSH5-204ENST00000375755 TOM1L1O75674 476 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 ABCD1P33897 745 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 CDKN2BP42772 138 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 HUNKP57058 714 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 MBTD1Q05BQ5 628 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 RABGAP1LQ5R372 815 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 SLFN12LQ6IEE8 588 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 PAOXQ6QHF9 649 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 CRLF3Q8IUI8 442 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 PDIK1LQ8N165 341 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 MARVELD2Q8N4S9 558 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 CEP70Q8NHQ1 597 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 IP6K2Q9UHH9 426 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 DTNAQ9Y4J8 743 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 KBTBD13C9JR72 458 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 HBP1O60381 514 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 ACO1P21399 889 aaKnown RBP13.33□□□□□ -0.28
MSH5-204ENST00000375755 GRB14Q14449 540 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 CCL14Q16627 93 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 TMEM132AQ24JP5 1023 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 ZNF394Q53GI3 561 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 ZNF554Q86TJ5 538 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 ACTL9Q8TC94 416 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 DIS3LQ8TF46 1054 aaKnown RBP13.33□□□□□ -0.28
MSH5-204ENST00000375755 CGRRF1Q99675 332 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 SHCBP1LQ9BZQ2 653 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 SENP6Q9GZR1 1112 aaPredicted RBP13.33□□□□□ -0.28
MSH5-204ENST00000375755 CXCL16Q9H2A7 254 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 CYP4F11Q9HBI6 524 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 RNF19AQ9NV58 838 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 MORF4L1Q9UBU8 362 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 MAD1L1Q9Y6D9 718 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 SCINQ9Y6U3 715 aa13.33□□□□□ -0.28
MSH5-204ENST00000375755 KAT6AQ92794 2004 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 GPR25O00155 361 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 DNAJA2O60884 412 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 SF3B1O75533 1304 aaKnown RBP eCLIP13.32□□□□□ -0.281e-8■■■■■ 28.9
MSH5-204ENST00000375755 PROCP04070 461 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 SLC5A2P31639 672 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 NRLP54845 237 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 MYL6P60660 151 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 OTUD4Q01804 1114 aaKnown RBP13.32□□□□□ -0.28
MSH5-204ENST00000375755 DCTN2Q13561 401 aaKnown RBP13.32□□□□□ -0.28
MSH5-204ENST00000375755 MXD4Q14582 209 aaPredicted RBP13.32□□□□□ -0.28
MSH5-204ENST00000375755 TCHHL1Q5QJ38 904 aaPredicted RBP13.32□□□□□ -0.28
MSH5-204ENST00000375755 FAM182AQ5T1J6 154 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 SCARA5Q6ZMJ2 495 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 ZCCHC23Q6ZST2 131 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 ENOSF1Q7L5Y1 443 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 NUDCD3Q8IVD9 361 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 YIPF2Q9BWQ6 316 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 SLC13A1Q9BZW2 595 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 TIMMDC1Q9NPL8 285 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 CDH22Q9UJ99 828 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 AKT3Q9Y243 479 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 POMPQ9Y244 141 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 STRNO43815 780 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 PEX1O43933 1283 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 CXCL8P10145 99 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 YWHAGP61981 247 aaKnown RBP eCLIP13.32□□□□□ -0.28
MSH5-204ENST00000375755 TFAMQ00059 246 aaKnown RBP13.32□□□□□ -0.28
MSH5-204ENST00000375755 OGDHQ02218 1023 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 BTKQ06187 659 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 CBX3Q13185 183 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 TUBB3Q13509 450 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 LAMC2Q13753 1193 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 GK3PQ14409 553 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 SYCP2LQ5T4T6 812 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
MSH5-204ENST00000375755 ATF7IP2Q5U623 682 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 PHF13Q86YI8 300 aaPredicted RBP13.32□□□□□ -0.28
MSH5-204ENST00000375755 HPS6Q86YV9 775 aa13.32□□□□□ -0.28
MSH5-204ENST00000375755 ZBTB8OSQ8IWT0 167 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms