RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 DHRS4L1P0CG22 281 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 HMOX2P30519 316 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 CPOXP36551 454 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 HSPA13P48723 471 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 EIF2B2P49770 351 aaKnown RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 ARHGAP8P85298 464 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 SLC25A3Q00325 362 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 BMT2Q1RMZ1 405 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 FAM110CQ1W6H9 321 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 KLHL38Q2WGJ6 581 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 TAPT1Q6NXT6 567 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 PPP4R1Q8TF05 950 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 CCDC124Q96CT7 223 aaKnown RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 ACP6Q9NPH0 428 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 KCND2Q9NZV8 630 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 SORCS3Q9UPU3 1222 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 KLF11O14901 512 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 EIF3DO15371 548 aaKnown RBP eCLIP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 XPOTO43592 962 aaKnown RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 TGFB3P10600 412 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 RBP3P10745 1247 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 CDH3P22223 829 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 PPP3CAQ08209 521 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 DEPDC1Q5TB30 811 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 RWDD4Q6NW29 188 aaKnown RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 NEPROQ6NW34 567 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 ADGRD1Q6QNK2 874 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 THNSL1Q8IYQ7 743 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 FAM111AQ96PZ2 611 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 GPATCH1Q9BRR8 931 aaKnown RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 KLC2Q9H0B6 622 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 SETD4Q9NVD3 440 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 H3BNX3 289 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 EDN1P05305 212 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 SERPINA6P08185 405 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 THRAP10827 490 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 ZNF23P17027 643 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 KLRC2P26717 231 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.4
C9orf3-203ENST00000375315 CA8P35219 290 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 DCDC5Q6ZRR9 648 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 ARID3BQ8IVW6 561 aaPredicted RBP12.52□□□□□ -0.4
C9orf3-203ENST00000375315 PQLC1Q8N2U9 271 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 RDM1Q8NG50 284 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 KAT5Q92993 513 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 PAFAH2Q99487 392 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 NEURL2Q9BR09 285 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 TMEM206Q9H813 350 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 SQORQ9Y6N5 450 aa12.52□□□□□ -0.4
C9orf3-203ENST00000375315 BAIAP3O94812 1187 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 LDHAP00338 332 aaKnown RBP12.52□□□□□ -0.41
C9orf3-203ENST00000375315 LGALS2P05162 132 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 TFPTP0C1Z6 253 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 TNNI1P19237 187 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 ARPC4P59998 168 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 TNFAIP2Q03169 654 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 ARHGAP1Q07960 439 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 CAPSQ13938 189 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 OASLQ15646 514 aaKnown RBP12.52□□□□□ -0.41
C9orf3-203ENST00000375315 SNRNP35Q16560 246 aaKnown RBP12.52□□□□□ -0.41
C9orf3-203ENST00000375315 ATG16L1Q676U5 607 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 PAOXQ6QHF9 649 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 AMIGO2Q86SJ2 522 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 LRGUKQ96M69 825 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 C7orf26Q96N11 449 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 HEMGNQ9BXL5 484 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 LIN28AQ9H9Z2 209 aaKnown RBP12.52□□□□□ -0.41
C9orf3-203ENST00000375315 UBE2TQ9NPD8 197 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-203ENST00000375315 IGSF9Q9P2J2 1179 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 PSMD13Q9UNM6 376 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 GIT1Q9Y2X7 761 aa12.52□□□□□ -0.41
C9orf3-203ENST00000375315 HEMK1Q9Y5R4 338 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-203ENST00000375315 B4GALT5O43286 388 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 AOC1P19801 751 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 VAMP7P51809 220 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 CDK18Q07002 472 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 BFSP1Q12934 665 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 NIPAL1Q6NVV3 410 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 SLC39A4Q6P5W5 647 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 TAS1R3Q7RTX0 852 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 APOPT1Q96IL0 206 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 PAIP1Q9H074 479 aaKnown RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 TRNAU1APQ9NX07 287 aaKnown RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 H3BRB1 525 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 CNOT3O75175 753 aaKnown RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 RALAP11233 206 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 MAPK4P31152 587 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 AQP5P55064 265 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 CREB5Q02930 508 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 PDE1CQ14123 709 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-203ENST00000375315 MORF4L2Q15014 288 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 PPM1KQ8N3J5 372 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 LZTR1Q8N653 840 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 TSPAN14Q8NG11 270 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 STARD8Q92502 1023 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 ACAP3Q96P50 834 aa12.51□□□□□ -0.41
C9orf3-203ENST00000375315 PCDHB18PQ96TA0 734 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms