RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 LACTB2Q53H82 288 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 C15orf52Q6ZUT6 534 aaKnown RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 KAT2BQ92831 832 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 ZCWPW1Q9H0M4 648 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 MUC3BQ9H195 1237 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 ETNK2Q9NVF9 386 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 VIRMAQ69YN4 1812 aaKnown RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 SLURP2P0DP57 97 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 FCGR1AP12314 374 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 DPEP1P16444 411 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 MGAT5BQ3V5L5 792 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 TRIM60Q495X7 471 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 GALNTL6Q49A17 601 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 NBPF12Q5TAG4 269 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 PHF13Q86YI8 300 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 SH3KBP1Q96B97 665 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 ZFRQ96KR1 1074 aaKnown RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 PALMDQ9NP74 551 aa11.83□□□□□ -0.52
PTCH1-203ENST00000375274 RBM22Q9NW64 420 aaKnown RBP eCLIP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 ABI2Q9NYB9 513 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-203ENST00000375274 SYNDIG1LA6NDD5 238 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 USP12O75317 370 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 BANF1O75531 89 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 BAIAP3O94812 1187 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 WDR47O94967 919 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 MYL4P12829 197 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 INSRRP14616 1297 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 HOXA10P31260 410 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 MAP3K7CLP57077 242 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 SLC6A3Q01959 620 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 SLC15A2Q16348 729 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 SPANXN3Q5MJ09 141 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 C10orf120Q5SQS8 335 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 MFSD14CQ5VZR4 134 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 EP400NLQ6ZTU2 488 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 ANKRD13AQ8IZ07 590 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 SEPT5Q99719 369 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 TSC22D4Q9Y3Q8 395 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 hCG_1818297A0A087WSY0 165 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 HNRNPCL2B2RXH8 293 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 DNM1LO00429 736 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 VPS26AO75436 327 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 ITGB5P18084 799 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 C15orf59Q2T9L4 293 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 PLEKHA7Q6IQ23 1121 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 TMC7Q7Z402 723 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 SLC22A9Q8IVM8 553 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 CELF6Q96J87 481 aaKnown RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 PCDHB18PQ96TA0 734 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 BRD8Q9H0E9 1235 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 PORCNQ9H237 461 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 SYTL2Q9HCH5 934 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 FBXO6Q9NRD1 293 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 A0A1W2PPM1 405 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 SMNDC1O75940 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 VAPBO95292 243 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 PIGNO95427 931 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 TPBGLP0DKB5 382 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 TSHRP16473 764 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 NPY5RQ15761 445 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 ATP6AP1LQ52LC2 224 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 TDRD10Q5VZ19 366 aaKnown RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 PATL1Q86TB9 770 aaKnown RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 MIB1Q86YT6 1006 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 TMCO5AQ8N6Q1 288 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 CCDC167Q9P0B6 97 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 MOSPD1Q9UJG1 213 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 NCF1BA6NI72 391 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 C2orf81A6NN90 581 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 NCF1CA8MVU1 366 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 MRASO14807 208 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 NCF1P14598 390 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 DSG3P32926 999 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 NAGLUP54802 743 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 PKNOX1P55347 436 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 CXCL9Q07325 125 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 FASTKQ14296 549 aaKnown RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 DHFR2Q86XF0 187 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 ATP6V0D2Q8N8Y2 350 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 B4GALNT2Q8NHY0 566 aa11.82□□□□□ -0.52
PTCH1-203ENST00000375274 COPS7BQ9H9Q2 264 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 EIF3LQ9Y262 564 aaKnown RBP11.82□□□□□ -0.52
PTCH1-203ENST00000375274 C5orf58C9J3I9 102 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ODC1P11926 461 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ADIGQ0VDE8 80 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 TAF2Q6P1X5 1199 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 CYP2R1Q6VVX0 501 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 RIPOR1Q6ZS17 1223 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 POLNQ7Z5Q5 900 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 NET1Q7Z628 596 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 PTAR1Q7Z6K3 402 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 DEFB106AQ8N104 65 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 KREMEN1Q96MU8 473 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 APBA2Q99767 749 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 WWOXQ9NZC7 414 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms