RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 DEPDC1BQ8WUY9 529 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 GLT1D1Q96MS3 346 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
UBR4-203ENST00000375225 HNRNPABQ99729 332 aaKnown RBP12.63□□□□□ -0.39
UBR4-203ENST00000375225 EBNA1BP2Q99848 306 aaKnown RBP12.63□□□□□ -0.39
UBR4-203ENST00000375225 C11orf84Q9BUA3 381 aaPredicted RBP12.63□□□□□ -0.39
UBR4-203ENST00000375225 APOL6Q9BWW8 343 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 BRD8Q9H0E9 1235 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 POPDC2Q9HBU9 364 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 CD248Q9HCU0 757 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 NPHS2Q9NP85 383 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 GPATCH2LQ9NWQ4 482 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 NOP53Q9NZM5 478 aaKnown RBP12.63□□□□□ -0.39
UBR4-203ENST00000375225 GGT7Q9UJ14 662 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 MAD1L1Q9Y6D9 718 aa12.63□□□□□ -0.39
UBR4-203ENST00000375225 A0A0A0MRY4 1105 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 TRIM49D1C9J1S8 452 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 MTSS1O43312 755 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 PYGBP11216 843 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 CCNFP41002 786 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 ACLYP53396 1101 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 ZBTB16Q05516 673 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 SNX17Q15036 470 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 STXBP5Q5T5C0 1151 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 ANKRD20A3Q5VUR7 823 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 GDF6Q6KF10 455 aaPredicted RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 ZNF449Q6P9G9 518 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 KCNT2Q6UVM3 1135 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 ARHGAP24Q8N264 748 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 ARRDC4Q8NCT1 418 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 CCDC110Q8TBZ0 833 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 ACMSDQ8TDX5 336 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 SH3TC2Q8TF17 1288 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 HTR3CQ8WXA8 447 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 KCTD13Q8WZ19 329 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 KHSRPQ92945 711 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBR4-203ENST00000375225 TTC17Q96AE7 1141 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 C18orf25Q96B23 403 aaPredicted RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 RSRC1Q96IZ7 334 aaKnown RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 PIWIL1Q96J94 861 aaKnown RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 SPATA13Q96N96 652 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 CSPG4P5Q96PW8 444 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 KCTD15Q96SI1 283 aaPredicted RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 SIKE1Q9BRV8 207 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 WDR83Q9BRX9 315 aaKnown RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 DUSP16Q9BY84 665 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 NXF3Q9H4D5 531 aaKnown RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 FAM96AQ9H5X1 160 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 SLCO1B3Q9NPD5 702 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 LNPEPQ9UIQ6 1025 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 FZD10Q9ULW2 581 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 STK38LQ9Y2H1 464 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 TRPV2Q9Y5S1 764 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 TRIP11Q15643 1979 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 SCN1AP35498 2009 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 AP3B1O00203 1094 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 TRAFD1O14545 582 aaPredicted RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 BIRC5O15392 142 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 NCAM2O15394 837 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 HAUS5O94927 633 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 CCDC130P13994 396 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 LRPAP1P30533 357 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 GARSP41250 739 aaKnown RBP12.62□□□□□ -0.39
UBR4-203ENST00000375225 MAGEA3P43357 314 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 SERPINB4P48594 390 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 KCNJ2P63252 427 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 MGAT5Q09328 741 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 ITGA7Q13683 1181 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 GLRA4Q5JXX5 417 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 TIFABQ6ZNK6 161 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 LIMS2Q7Z4I7 341 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 SERINC5Q86VE9 423 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 TMEM86AQ8N2M4 240 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 B3GALNT2Q8NCR0 500 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 SLC2A14Q8TDB8 520 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 KBTBD7Q8WVZ9 684 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 FAM149B1Q96BN6 582 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 STAMBPL1Q96FJ0 436 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 SLC9A7Q96T83 725 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 MED10Q9BTT4 135 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 TRIM62Q9BVG3 475 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBR4-203ENST00000375225 GRID1Q9ULK0 1009 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 CHKBQ9Y259 395 aa12.62□□□□□ -0.39
UBR4-203ENST00000375225 WDR91A4D1P6 747 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 SDR42E2A6NKP2 422 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 FAM159BA6NKW6 160 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 E7ENQ6 273 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 GOLGA8RI6L899 631 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 PPEF2O14830 753 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 CCDC22O60826 627 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 DNAJC6O75061 913 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 FAM200BP0CF97 657 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 NPR3P17342 541 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 PAX3P23760 479 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 PTPN4P29074 926 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 ETV4P43268 484 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms