RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 CLN3Q13286 438 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 MCTP1Q6DN14 999 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 USP53Q70EK8 1073 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 HSCBQ8IWL3 235 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 SORCS1Q8WY21 1168 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 REEP2Q9BRK0 252 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 MMTAG2Q9BU76 263 aaKnown RBP18.34■□□□□ 0.53
H2AFX-201ENST00000375167 GZF1Q9H116 711 aaPredicted RBP18.34■□□□□ 0.53
H2AFX-201ENST00000375167 SNX25Q9H3E2 840 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 PARVGQ9HBI0 331 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 LRRC4CQ9HCJ2 640 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 NOL7Q9UMY1 257 aaKnown RBP18.34■□□□□ 0.53
H2AFX-201ENST00000375167 SATB2Q9UPW6 733 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 NBASA2RRP1 2371 aa18.34■□□□□ 0.53
H2AFX-201ENST00000375167 UTP20O75691 2785 aaKnown RBP18.34■□□□□ 0.53
H2AFX-201ENST00000375167 SIGLEC6O43699 453 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 TMEM191BP0C7N4 346 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 C7P10643 843 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 PDCP20941 246 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 WNT7BP56706 349 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 RPS14P62263 151 aaKnown RBP18.33■□□□□ 0.53
H2AFX-201ENST00000375167 GTF2BQ00403 316 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 SCARA3Q6AZY7 606 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 BRSK2Q8IWQ3 736 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 KCTD17Q8N5Z5 321 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 SCAMP5Q8TAC9 235 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 HPS3Q969F9 1004 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 HPDLQ96IR7 371 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 WDR70Q9NW82 654 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 SIX4Q9UIU6 781 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 NCKAP1Q9Y2A7 1128 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 BSNQ9UPA5 3926 aa18.33■□□□□ 0.53
H2AFX-201ENST00000375167 A0A1W2PR77 199 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 SLC5A3P53794 718 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 ZNF211Q13398 564 aaPredicted RBP18.32■□□□□ 0.52
H2AFX-201ENST00000375167 POSTNQ15063 836 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 FNDC3BQ53EP0 1204 aaKnown RBP18.32■□□□□ 0.52
H2AFX-201ENST00000375167 ARSHQ5FYA8 562 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 GANCQ8TET4 914 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 LIN37Q96GY3 246 aaPredicted RBP18.32■□□□□ 0.52
H2AFX-201ENST00000375167 PIWIL1Q96J94 861 aaKnown RBP18.32■□□□□ 0.52
H2AFX-201ENST00000375167 CDK5RAP3Q96JB5 506 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 FAM84AQ96KN4 292 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 SLC46A1Q96NT5 459 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 FAM213AQ9BRX8 229 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 MTMR12Q9C0I1 747 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 TJP2Q9UDY2 1190 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 ATXN7L1Q9ULK2 861 aaPredicted RBP18.32■□□□□ 0.52
H2AFX-201ENST00000375167 ATP8B3O60423 1300 aa18.32■□□□□ 0.52
H2AFX-201ENST00000375167 TLR4O00206 839 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 TRIM38O00635 465 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 TIMM44O43615 452 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 PTPN1P18031 435 aaKnown RBP18.31■□□□□ 0.52
H2AFX-201ENST00000375167 ATP5C1P36542 298 aaKnown RBP18.31■□□□□ 0.52
H2AFX-201ENST00000375167 FYB2Q5VWT5 728 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 RBBP8NLQ8NC74 664 aaPredicted RBP18.31■□□□□ 0.52
H2AFX-201ENST00000375167 GOLGA1Q92805 767 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 SGF29Q96ES7 293 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 PLIN2Q99541 437 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 ABCG4Q9H172 646 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 ZHX3Q9H4I2 956 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 RBAKQ9NYW8 714 aaPredicted RBP18.31■□□□□ 0.52
H2AFX-201ENST00000375167 ICE1Q9Y2F5 2266 aa18.31■□□□□ 0.52
H2AFX-201ENST00000375167 LRRC72A6NJI9 287 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 CLDN5O00501 218 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 CYP26A1O43174 497 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 GJB6O95452 261 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 TBX18O95935 607 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 GNL1P36915 607 aaPredicted RBP18.3■□□□□ 0.52
H2AFX-201ENST00000375167 TOB1P50616 345 aaPredicted RBP18.3■□□□□ 0.52
H2AFX-201ENST00000375167 ZNF131P52739 623 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 HYIQ5T013 277 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 ZNF776Q68DI1 518 aaPredicted RBP18.3■□□□□ 0.52
H2AFX-201ENST00000375167 NCEH1Q6PIU2 408 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 Q6ZNB5 142 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 USP30Q70CQ3 517 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 ZNF366Q8N895 744 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 SERAC1Q96JX3 654 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 TLR8Q9NR97 1041 aaKnown RBP18.3■□□□□ 0.52
H2AFX-201ENST00000375167 COMMD8Q9NX08 183 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 IL37Q9NZH6 218 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 FAM92AA1XBS5 289 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 SDC3O75056 442 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 CHKAP35790 457 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 GALCP54803 685 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 FOXK1P85037 733 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 RILPL1Q5EBL4 403 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 HIST2H2BCQ6DN03 193 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 OR6B3Q8NGW1 331 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 P2RY11Q96G91 374 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 ANKRD36BP1Q96IX9 119 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 KCNK16Q96T55 309 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 B3GNT5Q9BYG0 378 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 TMEM245Q9H330 911 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 EBF2Q9HAK2 575 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 DMAP1Q9NPF5 467 aaPredicted RBP18.3■□□□□ 0.52
H2AFX-201ENST00000375167 PCDHGA8Q9Y5G5 932 aa18.3■□□□□ 0.52
H2AFX-201ENST00000375167 A0A1B0GVM2 712 aa18.29■□□□□ 0.52
H2AFX-201ENST00000375167 CDRT15L2A8MXV6 281 aa18.29■□□□□ 0.52
H2AFX-201ENST00000375167 TBCAO75347 108 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms