RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 MAD2L2Q9UI95 211 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PALD1Q9ULE6 856 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PPT2Q9UMR5 302 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PCDHGA10Q9Y5H3 936 aa8.19□□□□□ -1.1
USP48-203ENST00000374732 PGPEP1LA6NFU8 196 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 GPR89AB7ZAQ6 455 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 H0YCG3 227 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PER2O15055 1255 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PI15O43692 258 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 CIAO1O76071 339 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 RECQL4O94761 1208 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 EYA4O95677 639 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 LRG1P02750 347 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 ITGA2BP08514 1039 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 GPR89BP0CG08 455 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 TPBGLP0DKB5 382 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 HSD3B1P14060 373 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PITPNBP48739 271 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 IFI35P80217 286 aaPredicted RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 HPCAP84074 193 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 RELAQ04206 551 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PRKCZQ05513 592 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 CALCOCO2Q13137 446 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 SGSM1Q2NKQ1 1148 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 AARS2Q5JTZ9 985 aaKnown RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 TPRA1Q86W33 373 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PM20D2Q8IYS1 436 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 FUKQ8N0W3 1084 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PRR18Q8N4B5 295 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 TMEM40Q8WWA1 233 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 MFSD3Q96ES6 412 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 ZNF668Q96K58 619 aaPredicted RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 OPALINQ96PE5 141 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 TARS2Q9BW92 718 aaKnown RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 CRNKL1Q9BZJ0 848 aaKnown RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 BCL2L14Q9BZR8 327 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 TTYH3Q9C0H2 523 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 C1orf112Q9NSG2 853 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 ZMYM5Q9UJ78 669 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 TINAGQ9UJW2 476 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 RNF24Q9Y225 148 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PLAAQ9Y263 795 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 ATXN2Q99700 1313 aaKnown RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 RFX7Q2KHR2 1363 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 PEX11AO75192 247 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 BCAS2O75934 225 aaPredicted RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 TCN1P20061 433 aaPredicted RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 GRK6P43250 576 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 HTD2P86397 168 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 DNAJC3Q13217 504 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 ZNF177Q13360 481 aaPredicted RBP8.18□□□□□ -1.1
USP48-203ENST00000374732 MADCAM1Q13477 382 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 KCNC3Q14003 757 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 DHCR24Q15392 516 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 C12orf60Q5U649 245 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 BTBD8Q5XKL5 378 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 CDH24Q86UP0 819 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 FANCBQ8NB91 859 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PCYOX1LQ8NBM8 494 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 TTLL11Q8NHH1 800 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 LPGAT1Q92604 370 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 CCDC74BQ96LY2 380 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 PPP1R16BQ96T49 567 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 TRIM15Q9C019 465 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 SUV39H2Q9H5I1 410 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 EVA1AQ9H8M9 152 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 ARMC1Q9NVT9 282 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 GID8Q9NWU2 228 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 STK17AQ9UEE5 414 aa8.18□□□□□ -1.1
USP48-203ENST00000374732 KIAA1551Q9HCM1 1747 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 A0A1B0GVL5 298 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 H0YIV9 168 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 TRIM77I1YAP6 450 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 DNAJB6O75190 326 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 GPC4O75487 556 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 CRTAPO75718 401 aaPredicted RBP8.17□□□□□ -1.1
USP48-203ENST00000374732 SLC5A2P31639 672 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 SLC15A1P46059 708 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 PCYT1AP49585 367 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 UBE2IP63279 158 aaKnown RBP8.17□□□□□ -1.1
USP48-203ENST00000374732 EHHADHQ08426 723 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 CAMK2DQ13557 499 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 TRIM25Q14258 630 aaKnown RBP8.17□□□□□ -1.1
USP48-203ENST00000374732 DLGAP5Q15398 846 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 DUPD1Q68J44 220 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 Q6ZUG5 572 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 CRYBG2Q8N1P7 616 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 SCFD2Q8WU76 684 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 CPT1BQ92523 772 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 RAD51AP1Q96B01 352 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 ARHGEF26Q96DR7 871 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 ZNF274Q96GC6 653 aaPredicted RBP8.17□□□□□ -1.1
USP48-203ENST00000374732 ARFGAP3Q9NP61 516 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 TRMT13Q9NUP7 481 aaKnown RBP8.17□□□□□ -1.1
USP48-203ENST00000374732 DNAJB9Q9UBS3 223 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 HCN2Q9UL51 889 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 ZDHHC9Q9Y397 364 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 KCPQ6ZWJ8 1503 aa8.17□□□□□ -1.1
USP48-203ENST00000374732 SYCE3A1L190 88 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms