RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 XPO1O14980 1071 aaKnown RBP6.46□□□□□ -1.37
PTPN3-202ENST00000374541 NDUFS3O75489 264 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 ACADSBP45954 432 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 USP11P51784 963 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 ZNF211Q13398 564 aaPredicted RBP6.46□□□□□ -1.37
PTPN3-202ENST00000374541 LLGL1Q15334 1064 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 NAPEPLDQ6IQ20 393 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 MIB1Q86YT6 1006 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 C19orf18Q8NEA5 215 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 OMA1Q96E52 524 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 CDK5RAP1Q96SZ6 601 aaKnown RBP6.46□□□□□ -1.37
PTPN3-202ENST00000374541 UBXN6Q9BZV1 441 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 TMEM117Q9H0C3 514 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 TASP1Q9H6P5 420 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 NEU2Q9Y3R4 380 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 RGPD2P0DJD1 1756 aa6.46□□□□□ -1.37
PTPN3-202ENST00000374541 NFATC1O95644 943 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 MLNP12872 115 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PTPN2P17706 415 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 GNL1P36915 607 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 GJA8P48165 433 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PEX5P50542 639 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 CHRNB3Q05901 458 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 EPS8Q12929 822 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 SGSM1Q2NKQ1 1148 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 RASGRP2Q7LDG7 609 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 C16orf62Q7Z3J2 963 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ATPAF2Q8N5M1 289 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 USP13Q92995 863 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 VPS33AQ96AX1 596 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 EIF2AK1Q9BQI3 630 aaKnown RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 TMCC3Q9ULS5 477 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 MAN2B1O00754 1011 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 GLRA3O75311 464 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 MED26O95402 600 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 TMEM253P0C7T8 217 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 CNTFP26441 200 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PRCPP42785 496 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ITGA9Q13797 1035 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PDIA5Q14554 519 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 TTLL9Q3SXZ7 439 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 POTEEQ6S8J3 1075 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 KRT73Q86Y46 540 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 GSPT2Q8IYD1 628 aaKnown RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF483Q8TF39 744 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 DCLRE1BQ9H816 532 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 EFCAB1Q9HAE3 211 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 NDOR1Q9UHB4 597 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PCSK1NQ9UHG2 260 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 COLQQ9Y215 455 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 GSG1L2A8MUP6 293 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ANKRD65E5RJM6 399 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 KLHL41O60662 606 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ASS1P00966 412 aaKnown RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 KRT6AP02538 564 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 AKAP5P24588 427 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 RBMS1P29558 406 aaKnown RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 AKT1P31749 480 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 FDFT1P37268 417 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PDE12Q6L8Q7 609 aaKnown RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 MFSD5Q6N075 450 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PHACTR4Q8IZ21 702 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 CERS5Q8N5B7 392 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 SYTL5Q8TDW5 730 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 GMCL1Q96IK5 515 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ELMO2Q96JJ3 720 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 LIMD1Q9UGP4 676 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 A0A1B0GTH6 734 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 POTEFA5A3E0 1075 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 POTECB2RU33 542 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 CSDE1O75534 798 aaKnown RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 IL18RAPO95256 599 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 WEE2P0C1S8 567 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 MYBL2P10244 700 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 STAT5AP42229 794 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 CDH8P55286 799 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 FOXD4Q12950 439 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ALX1Q15699 326 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 WDR45BQ5MNZ6 344 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 RSBN1Q5VWQ0 802 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PCNX4Q63HM2 1172 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 CYP2U1Q7Z449 544 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 PRPF39Q86UA1 669 aaKnown RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ZNF589Q86UQ0 364 aaPredicted RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 C1orf54Q8WWF1 131 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 CAAP1Q9H8G2 361 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 ARHGEF3Q9NR81 526 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 TLR8Q9NR97 1041 aaKnown RBP6.46□□□□□ -1.38
PTPN3-202ENST00000374541 SPACA6W5XKT8 324 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 COL18A1P39060 1754 aa6.46□□□□□ -1.38
PTPN3-202ENST00000374541 TMEM120BA0PK00 339 aa6.45□□□□□ -1.38
PTPN3-202ENST00000374541 F8W810 466 aa6.45□□□□□ -1.38
PTPN3-202ENST00000374541 ERVK-10P10266 1014 aa6.45□□□□□ -1.38
PTPN3-202ENST00000374541 NOS2P35228 1153 aa6.45□□□□□ -1.38
PTPN3-202ENST00000374541 GEMIN4P57678 1058 aaKnown RBP6.45□□□□□ -1.38
PTPN3-202ENST00000374541 PEX6Q13608 980 aa6.45□□□□□ -1.38
PTPN3-202ENST00000374541 SIM2Q14190 667 aaPredicted RBP6.45□□□□□ -1.38
PTPN3-202ENST00000374541 SPDYAQ5MJ70 313 aa6.45□□□□□ -1.38
PTPN3-202ENST00000374541 ANKRD40Q6AI12 368 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms