RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 CDK5RAP1Q96SZ6 601 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 EBNA1BP2Q99848 306 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 PRMT1Q99873 361 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 ZBED2Q9BTP6 218 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 FBXO44Q9H4M3 255 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 DHX35Q9H5Z1 703 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 RGS18Q9NS28 235 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 FBXW11Q9UKB1 542 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 PADI3Q9ULW8 664 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 HES2Q9Y543 173 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 USP3Q9Y6I4 520 aa9.01□□□□□ -0.97
SNRNP40-202ENST00000373720 CCT8L1PA6NM43 557 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 TYROBPO43914 113 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 AP1G2O75843 785 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 ALDH1A2O94788 518 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 OAZ2O95190 189 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 CHRNA1P02708 482 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 LTFP02788 710 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 MT-ND3P03897 115 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 ASGR1P07306 291 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 FGFR1P11362 822 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 LCP1P13796 627 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 LMO2P25791 158 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 ADORA2BP29275 332 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 MAGEA11P43364 429 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 SLCO1A2P46721 670 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 NPY2RP49146 381 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 CXCR3P49682 368 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 FLT3LGP49771 235 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 SCNN1GP51170 649 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 TKTL1P51854 596 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 KPNA1P52294 538 aaPredicted RBP9□□□□□ -0.97
SNRNP40-202ENST00000373720 SEC24CP53992 1094 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 BEX3Q00994 111 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 SLC18A2Q05940 514 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 ADCY1Q08828 1119 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 ADIGQ0VDE8 80 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 PRPSAP1Q14558 356 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 PPP2R5DQ14738 602 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 SETDB1Q15047 1291 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 PRKD1Q15139 912 aaPredicted RBP9□□□□□ -0.97
SNRNP40-202ENST00000373720 CDO1Q16878 200 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 INSCQ1MX18 579 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 DCAF6Q58WW2 860 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 GLRA4Q5JXX5 417 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 MAP3K21Q5TCX8 1036 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 HHATQ5VTY9 493 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 DAB2IPQ5VWQ8 1189 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 SCARA3Q6AZY7 606 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 GDF6Q6KF10 455 aaPredicted RBP9□□□□□ -0.97
SNRNP40-202ENST00000373720 FAM35AQ86V20 835 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 SRRM1Q8IYB3 904 aaKnown RBP9□□□□□ -0.97
SNRNP40-202ENST00000373720 DEFB106AQ8N104 65 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 MICALL1Q8N3F8 863 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 ZNF276Q8N554 614 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 GSTCDQ8NEC7 633 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 CFAP61Q8NHU2 1237 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 LRRC8CQ8TDW0 803 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 RNF139Q8WU17 664 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 FAM149B1Q96BN6 582 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 HDAC11Q96DB2 347 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 C1orf74Q96LT6 269 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 TSGA13Q96PP4 275 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 PPP1R16BQ96T49 567 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 COLEC11Q9BWP8 271 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 APOL6Q9BWW8 343 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 PITPNM3Q9BZ71 974 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 IQCGQ9H095 443 aaKnown RBP9□□□□□ -0.97
SNRNP40-202ENST00000373720 WDCPQ9H6R7 721 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 CATSPERBQ9H7T0 1116 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 KLHL11Q9NVR0 708 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 MTMR10Q9NXD2 777 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 DTLQ9NZJ0 730 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 TJP2Q9UDY2 1190 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 STK39Q9UEW8 545 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 ZC3H7BQ9UGR2 993 aaKnown RBP9□□□□□ -0.97
SNRNP40-202ENST00000373720 AAR2Q9Y312 384 aaKnown RBP9□□□□□ -0.97
SNRNP40-202ENST00000373720 HEY1Q9Y5J3 304 aa9□□□□□ -0.97
SNRNP40-202ENST00000373720 OR6C75A6NL08 312 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 DCDC2CA8MYV0 355 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 H0YHG0 523 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 M0QYT0 321 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 EEF2KO00418 725 aaKnown RBP8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 TRIM66O15016 1216 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 BIRC5O15392 142 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 DNAJC8O75937 253 aaPredicted RBP8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 APOEP02649 317 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 POLBP06746 335 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 CD48P09326 243 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 ZSCAN5DPP0CG00 497 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 SRGAP2BP0DMP2 458 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 TROVE2P10155 538 aaKnown RBP eCLIP8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 CCDC130P13994 396 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 CA4P22748 312 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 RBL1P28749 1068 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 THPOP40225 353 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 MLH1P40692 756 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 IFNAR2P48551 515 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 GDF10P55107 478 aa8.99□□□□□ -0.97
SNRNP40-202ENST00000373720 GPX6P59796 221 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms