RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 BZW1Q7L1Q6 419 aaKnown RBP20.25■□□□□ 0.83
HDAC1-201ENST00000373548 NETO2Q8NC67 525 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 FBF1Q8TES7 1133 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 ZNF296Q8WUU4 475 aaPredicted RBP20.25■□□□□ 0.83
HDAC1-201ENST00000373548 HTR3CQ8WXA8 447 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 ZNF317Q96PQ6 595 aaPredicted RBP20.25■□□□□ 0.83
HDAC1-201ENST00000373548 LGMNQ99538 433 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 PRMT1Q99873 361 aaKnown RBP20.25■□□□□ 0.83
HDAC1-201ENST00000373548 COLEC11Q9BWP8 271 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 ACSS3Q9H6R3 686 aa20.25■□□□□ 0.83
HDAC1-201ENST00000373548 SF3B1O75533 1304 aaKnown RBP eCLIP20.25■□□□□ 0.834e-6■■■■■ 58.8
HDAC1-201ENST00000373548 RASA4BC9J798 803 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 DCLK1O15075 740 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 RASA4O43374 803 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 SELPP16109 830 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 VEGFBP49765 207 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 PAFAH1B3Q15102 231 aaKnown RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 QPCTQ16769 361 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 TRABD2AQ86V40 505 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 SPATA2LQ8IUW3 424 aaPredicted RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 VPS52Q8N1B4 723 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 SCAMP5Q8TAC9 235 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 CHMP6Q96FZ7 201 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 FTHL17Q9BXU8 183 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 FRMD8Q9BZ67 464 aaPredicted RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 CCDC134Q9H6E4 229 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 KCNK9Q9NPC2 374 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 DNAJB4Q9UDY4 337 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 FETUBQ9UGM5 382 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 KBTBD13C9JR72 458 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 F9P00740 461 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 OR4Q2P0C623 313 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 OR1G1P47890 313 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 CXCR3P49682 368 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 GEMIN4P57678 1058 aaKnown RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 NR1H3Q13133 447 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 GPNMBQ14956 572 aa20.24■□□□□ 0.83
HDAC1-201ENST00000373548 PRKD1Q15139 912 aaPredicted RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 PKN2Q16513 984 aaKnown RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 CAND1Q86VP6 1230 aaKnown RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 MRRFQ96E11 262 aaKnown RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 MYO18AQ92614 2054 aaKnown RBP20.24■□□□□ 0.83
HDAC1-201ENST00000373548 NBNO60934 754 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 DRD4P21917 467 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 CDK7P50613 346 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 TAC4Q86UU9 113 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 MCUQ8NE86 351 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 MGARPQ8TDB4 240 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.23■□□□□ 0.83
HDAC1-201ENST00000373548 TMEM161AQ9NX61 479 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 KANSL3Q9P2N6 904 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 PSMC3IPQ9P2W1 217 aaPredicted RBP20.23■□□□□ 0.83
HDAC1-201ENST00000373548 PRG3Q9Y2Y8 225 aaPredicted RBP20.23■□□□□ 0.83
HDAC1-201ENST00000373548 VWA8A3KMH1 1905 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 TTC3P53804 2025 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 PIAS1O75925 651 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 IFNAR2P48551 515 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 LRRC14Q15048 493 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 C4orf50Q6ZRC1 276 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 ARHGEF18Q6ZSZ5 1173 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 ANKRD42Q8N9B4 389 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 DHRS4Q9BTZ2 278 aa20.23■□□□□ 0.83
HDAC1-201ENST00000373548 A0A0A0MRY4 1105 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 OAZ2O95190 189 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 ATP2A2P16615 1042 aaKnown RBP20.22■□□□□ 0.83
HDAC1-201ENST00000373548 ERCC2P18074 760 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 TPI1P60174 286 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 KLHL38Q2WGJ6 581 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 ARL13BQ3SXY8 428 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 ANKRD20A2Q5SQ80 823 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 ANKRD20A1Q5TYW2 823 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 ANKRD20A3Q5VUR7 823 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 ZNF534Q76KX8 674 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 TP53INP2Q8IXH6 220 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 FAM126BQ8IXS8 530 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 DQX1Q8TE96 717 aaKnown RBP20.22■□□□□ 0.83
HDAC1-201ENST00000373548 SPATA13Q96N96 652 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 WDCPQ9H6R7 721 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 MYO16Q9Y6X6 1858 aa20.22■□□□□ 0.83
HDAC1-201ENST00000373548 TNFRSF10BO14763 440 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 TPSB2P20231 275 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 GRIK1P39086 918 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 HCAR3P49019 387 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 GLUD2P49448 558 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 SLC5A3P53794 718 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 PRMT2P55345 433 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 SEMA5AQ13591 1074 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 PDK1Q15118 436 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 TPSAB1Q15661 275 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 SLC39A12Q504Y0 691 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 DBF4BQ8NFT6 615 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 TET1Q8NFU7 2136 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 SH3TC2Q8TF17 1288 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 P2RY11Q96G91 374 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 PAFAH2Q99487 392 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 TKTL2Q9H0I9 626 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 ZCWPW1Q9H0M4 648 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 PRDM12Q9H4Q4 367 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 COL6A1P12109 1028 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 KRT15P19012 456 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms