RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 SH3TC2Q8TF17 1288 aa13.85□□□□□ -0.19
CSTF2-201ENST00000372972 LRRC39Q96DD0 335 aa13.85□□□□□ -0.19
CSTF2-201ENST00000372972 PAIP2Q9BPZ3 127 aaKnown RBP13.85□□□□□ -0.19
CSTF2-201ENST00000372972 ACBD6Q9BR61 282 aa13.85□□□□□ -0.19
CSTF2-201ENST00000372972 KDM4CQ9H3R0 1056 aa13.85□□□□□ -0.19
CSTF2-201ENST00000372972 RRN3Q9NYV6 651 aa13.85□□□□□ -0.19
CSTF2-201ENST00000372972 MFHAS1Q9Y4C4 1052 aa13.85□□□□□ -0.19
CSTF2-201ENST00000372972 IKBKGQ9Y6K9 419 aa13.85□□□□□ -0.19
CSTF2-201ENST00000372972 CCT8L1PA6NM43 557 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 HHLA1C9JL84 531 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 CREB3O43889 395 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 PIAS1O75925 651 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 FSBPO95073 299 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 CYP11A1P05108 521 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 CA4P22748 312 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 RPA3P35244 121 aaPredicted RBP13.84□□□□□ -0.19
CSTF2-201ENST00000372972 ADRA1BP35368 520 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 RABGGTBP53611 331 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 CACNA2D1P54289 1103 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 GRIK3Q13003 919 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 KBTBD12Q3ZCT8 623 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 GPRIN1Q7Z2K8 1008 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 AGGF1Q8N302 714 aaeCLIP13.84□□□□□ -0.19
CSTF2-201ENST00000372972 CCDC33Q8N5R6 958 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 SLC43A3Q8NBI5 491 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 CCT6BQ92526 530 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 FERMT1Q9BQL6 677 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 RTP3Q9BQQ7 232 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 CSNK1G1Q9HCP0 422 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 STARD7Q9NQZ5 370 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 TMPRSS4Q9NRS4 437 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 TMEM30AQ9NV96 361 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 DSEQ9UL01 958 aa13.84□□□□□ -0.19
CSTF2-201ENST00000372972 I3L4J1 428 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 TRDMT1O14717 391 aaKnown RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 OAS1P00973 400 aaKnown RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 LTFP02788 710 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 USP17L7P0C7H9 530 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 CKBP12277 381 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 NCAM1P13591 858 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 TAC1P20366 129 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 FOXN2P32314 431 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 LACTB2Q53H82 288 aaPredicted RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 FAM171BQ6P995 826 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 MZB1Q8WU39 189 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 SLC44A1Q8WWI5 657 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 NTAN1Q96AB6 310 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 ALKBH8Q96BT7 664 aaKnown RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 PGAP3Q96FM1 320 aaPredicted RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 CFAP36Q96G28 342 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.192e-6■■■■■ 36
CSTF2-201ENST00000372972 ACTR5Q9H9F9 607 aaPredicted RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 ZC3H7BQ9UGR2 993 aaKnown RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 FBXW11Q9UKB1 542 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 USP15Q9Y4E8 981 aaPredicted RBP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 SQORQ9Y6N5 450 aa13.83□□□□□ -0.19
CSTF2-201ENST00000372972 SF3B1O75533 1304 aaKnown RBP eCLIP13.83□□□□□ -0.19
CSTF2-201ENST00000372972 A0A0A0MRY4 1105 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 IQANK1A0A1B0GTG1 560 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 M0QZQ0 153 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 EEF2KO00418 725 aaKnown RBP13.83□□□□□ -0.2
CSTF2-201ENST00000372972 MFSD11O43934 449 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 STK10O94804 968 aaKnown RBP13.83□□□□□ -0.2
CSTF2-201ENST00000372972 ZWINTO95229 277 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 CPP00450 1065 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 F9P00740 461 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 INHBAP08476 426 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 GSTA2P09210 222 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 FDFT1P37268 417 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 MAGEA3P43357 314 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 ACTN3Q08043 901 aaPredicted RBP13.83□□□□□ -0.2
CSTF2-201ENST00000372972 SCAPQ12770 1279 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 SF3A3Q12874 501 aaKnown RBP eCLIP13.83□□□□□ -0.2
CSTF2-201ENST00000372972 TUSC3Q13454 348 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 SEMA5AQ13591 1074 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 DPYSQ14117 519 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 PAFAH1B3Q15102 231 aaKnown RBP13.83□□□□□ -0.2
CSTF2-201ENST00000372972 PDK1Q15118 436 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 ANKRD20A2Q5SQ80 823 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 ANKRD20A1Q5TYW2 823 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 ANKRD20A3Q5VUR7 823 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 RFX8Q6ZV50 586 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 MYLPFQ96A32 169 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 GRAMD1AQ96CP6 724 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 UROC1Q96N76 676 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 SPATA13Q96N96 652 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 LGMNQ99538 433 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 XAB2Q9HCS7 855 aaKnown RBP13.83□□□□□ -0.2
CSTF2-201ENST00000372972 WDR6Q9NNW5 1121 aaKnown RBP13.83□□□□□ -0.2
CSTF2-201ENST00000372972 PHF24Q9UPV7 400 aa13.83□□□□□ -0.2
CSTF2-201ENST00000372972 SUN1O94901 812 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 VAV1P15498 845 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 BRCC3P46736 316 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 GLUD2P49448 558 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 SARNPP82979 210 aaKnown RBP13.82□□□□□ -0.2
CSTF2-201ENST00000372972 CDK16Q00536 496 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 AP1B1Q10567 949 aa13.82□□□□□ -0.2
CSTF2-201ENST00000372972 PRKD1Q15139 912 aaPredicted RBP13.82□□□□□ -0.2
CSTF2-201ENST00000372972 ARL13BQ3SXY8 428 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms