RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ZMAT2Q96NC0 199 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 FAM193BQ96PV7 902 aaPredicted RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 RC3H2Q9HBD1 1191 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 TBC1D13Q9NVG8 400 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 HEY2Q9UBP5 337 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 CNTN6Q9UQ52 1028 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 MRPL42Q9Y6G3 142 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 IQANK1A0A1B0GTG1 560 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SMIM28A0A1B0GU29 152 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 A0A1W2PPM1 405 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 H0Y3Z8 333 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 CAPN9O14815 690 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SPAG6O75602 509 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 DDHD2O94830 711 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 THP07101 528 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 DNAJB2P25686 324 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 TUBP50607 506 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 RPS6KA3P51812 740 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 WNT7BP56706 349 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 RPL26P61254 145 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SLC18A2Q05940 514 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 PDIA2Q13087 525 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 RAB30Q15771 203 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 TRMT5Q32P41 509 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 C6orf163Q5TEZ5 329 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ALKAL1Q6UXT8 129 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 DSTYKQ6XUX3 929 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 NET1Q7Z628 596 aaPredicted RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SPRED2Q7Z698 418 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ADGRG6Q86SQ4 1221 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SDCCAG8Q86SQ7 713 aaPredicted RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 PRUNE1Q86TP1 453 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 TMPRSS6Q8IU80 811 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ZBED8Q8IZ13 594 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 LRRC43Q8N309 656 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 CCDC110Q8TBZ0 833 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 CCDC127Q96BQ5 260 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ZNF184Q99676 751 aaPredicted RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 TSSK1BQ9BXA7 367 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 MRPL9Q9BYD2 267 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 CERS4Q9HA82 394 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SLC28A3Q9HAS3 691 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 PLEKHA5Q9HAU0 1116 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 GPAMQ9HCL2 828 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ARL8BQ9NVJ2 186 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 CACNG4Q9UBN1 327 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 DNPEPQ9ULA0 475 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 LINC01553A4QN01 128 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 NT5C1B-RDH14C9J2C7 533 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 SOX1O00570 391 aaPredicted RBP11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 ESRRAP11474 423 aaPredicted RBP11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 TBXAS1P24557 533 aaPredicted RBP11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 ADRA1DP25100 572 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 PBX3P40426 434 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 CACNA2D1P54289 1103 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 GPX6P59796 221 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 PRKD1Q15139 912 aaPredicted RBP11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 DNAL1Q4LDG9 190 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 PPP2R2DQ66LE6 453 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 JADE1Q6IE81 842 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 SPOCD1Q6ZMY3 1216 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 BRSK2Q8IWQ3 736 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 TMEM130Q8N3G9 435 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 NIPA2Q8N8Q9 360 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 SLC35B2Q8TB61 432 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 TCP10LQ8TDR4 215 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 PYROXD1Q8WU10 500 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 CPA5Q8WXQ8 436 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 NCSTNQ92542 709 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 PTPRN2Q92932 1015 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 C18orf25Q96B23 403 aaPredicted RBP11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 CWH43Q9H720 699 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 NRDE2Q9H7Z3 1164 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 GOLGA2P5Q9HBQ8 144 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 DMAP1Q9NPF5 467 aaPredicted RBP11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 KCNK4Q9NYG8 393 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 CNTN3Q9P232 1028 aa11.85□□□□□ -0.51
TSPAN1-201ENST00000372003 MICAL3Q7RTP6 2002 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 hCG_1818297A0A087WSY0 165 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 FAM170AA1A519 330 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 CASTOR2A6NHX0 329 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 B4GALT3O60512 393 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 TBX10O75333 385 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 FKBP6O75344 327 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 KRT1P04264 644 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 CALB1P05937 261 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 NFICP08651 508 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 DLDP09622 509 aaKnown RBP11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 KCNE1P15382 129 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 ETV4P43268 484 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 OR1G1P47890 313 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 NEK3P51956 506 aa11.84□□□□□ -0.51
TSPAN1-201ENST00000372003 TFAMQ00059 246 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms