RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 KCNK4Q9NYG8 393 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ATMINO43313 823 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 PRKAB2O43741 272 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 NFX1Q12986 1120 aaKnown RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 MAD2L1Q13257 205 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 CBFBQ13951 182 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 NR6A1Q15406 480 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ZNF613Q6PF04 617 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 C1QTNF1Q9BXJ1 281 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 PI4KBQ9UBF8 816 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 C3orf18Q9UK00 162 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 IQCMA0A1B0GVH7 501 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ANPEPP15144 967 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 FBXW8Q8N3Y1 598 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ACTRT2Q8TDY3 377 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 KLHL28Q9NXS3 571 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 SSR3Q9UNL2 185 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 GRK4P32298 578 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 KLK7P49862 253 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 S100A12P80511 92 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 MPP2Q14168 576 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 TTC23Q5W5X9 447 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 FAM43BQ6ZT52 329 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 SLCO6A1Q86UG4 719 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ZNF276Q8N554 614 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ZNF75CPQ92670 426 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ZSWIM1Q9BR11 485 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 LEMD3Q9Y2U8 911 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 MPOP05164 745 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ENO2P09104 434 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 SLC45A4Q5BKX6 768 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 MCFD2Q8NI22 146 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 OXER1Q8TDS5 423 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 POLR3FQ9H1D9 316 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-201ENST00000371817 SORCS3Q9UPU3 1222 aa15.63■□□□□ 0.09
COL5A1-201ENST00000371817 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 SERPINE1P05121 402 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 RARBP10826 455 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 DDX39BQ13838 428 aaKnown RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 EPC2Q52LR7 807 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 VMP1Q96GC9 406 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 CUEDC1Q9NWM3 386 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 FAM240BA0A1B0GVZ2 78 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 TMC3Q7Z5M5 1100 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 NEDD4P46934 1319 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 NCF1BA6NI72 391 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 NCF1CA8MVU1 366 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ASMTLO95671 621 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 PDGFRBP09619 1106 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 NCF1P14598 390 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ZNF844Q08AG5 666 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ESRP1Q6NXG1 681 aaKnown RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ZNF540Q8NDQ6 660 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 DCAF4Q8WV16 495 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 SLC9A6Q92581 669 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ADPRHL2Q9NX46 363 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ANAPC2Q9UJX6 822 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 C2orf81A6NN90 581 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 STX16-NPEPL1H3BU86 382 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 STX16O14662 325 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 RECQL5O94762 991 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 CPSF4O95639 269 aaKnown RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 RPL19P84098 196 aaKnown RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 FGD3Q5JSP0 725 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 MED28Q9H204 178 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 VPS26AO75436 327 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 RHOBTB3O94955 611 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 USP17L8P0C7I0 530 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 TPBGLP0DKB5 382 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ERAP2Q6P179 960 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 KCTD4Q8WVF5 259 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 MAP3K20Q9NYL2 800 aaKnown RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 SNX7Q9UNH6 387 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 KDM5CP41229 1560 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 VPS4BO75351 444 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 PRKAR2AP13861 404 aaKnown RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ITIH1P19827 911 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 VPS72Q15906 364 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 EGFLAMQ63HQ2 1017 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 TRPV3Q8NET8 790 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 ERMAPQ96PL5 475 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 TBC1D24Q9ULP9 559 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 SLC9A8Q9Y2E8 581 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 AP3M1Q9Y2T2 418 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 SPACA6W5XKT8 324 aa15.62■□□□□ 0.09
COL5A1-201ENST00000371817 DENND4BO75064 1496 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-201ENST00000371817 KIAA0391O15091 583 aaKnown RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 RIPK2O43353 540 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 C1orf189Q5VU69 101 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 KIF12Q96FN5 646 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 TBC1D10AQ9BXI6 508 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 UBP1Q9NZI7 540 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 TRIM3O75382 744 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-201ENST00000371817 CAMTA2O94983 1202 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 HPGDP15428 266 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 RAB15P59190 212 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 XIAPP98170 497 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 URGCPQ8TCY9 931 aa15.61■□□□□ 0.09
COL5A1-201ENST00000371817 TCP10LQ8TDR4 215 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms