RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 FASP25445 335 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 RCVRNP35243 200 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 SERPINH1P50454 418 aaKnown RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 DLG4P78352 724 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 GPATCH4Q5T3I0 446 aaKnown RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 PAGE2Q7Z2X7 111 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 ZNF410Q86VK4 478 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 DNAJC19Q96DA6 116 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 TSPAN18Q96SJ8 248 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 RIOK1Q9BRS2 568 aaKnown RBP12.09□□□□□ -0.47
PTPN1-201ENST00000371621 OSBPL11Q9BXB4 747 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 PRRG3Q9BZD7 231 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 EPB41L4BQ9H329 900 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 SMARCAD1Q9H4L7 1026 aa12.09□□□□□ -0.47
PTPN1-201ENST00000371621 HEATR9A2RTY3 570 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 FSCN2O14926 492 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 BIRC5O15392 142 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 TFAP2AP05549 437 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 CDH2P19022 906 aaPredicted RBP12.08□□□□□ -0.47
PTPN1-201ENST00000371621 IL12RB1P42701 662 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 PSMC5P62195 406 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 MAPRE1Q15691 268 aaKnown RBP12.08□□□□□ -0.47
PTPN1-201ENST00000371621 PABPC1LQ4VXU2 614 aaKnown RBP12.08□□□□□ -0.47
PTPN1-201ENST00000371621 TIGD2Q4W5G0 525 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 SLC9A4Q6AI14 798 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 KDELC2Q7Z4H8 507 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 SLFN11Q7Z7L1 901 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 CBWD2Q8IUF1 395 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 DEPDC4Q8N2C3 294 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 TCAIMQ8N3R3 496 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 ADCY4Q8NFM4 1077 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 CYP4F12Q9HCS2 524 aa12.08□□□□□ -0.47
PTPN1-201ENST00000371621 ITSN1Q15811 1721 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 HSPA1AP0DMV8 641 aaKnown RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 HSPA1BP0DMV9 641 aaKnown RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 AVPR1AP37288 418 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 NLRP11P59045 1033 aaKnown RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 CRADDP78560 199 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 YWHAHQ04917 246 aaPredicted RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 IFRD2Q12894 506 aaPredicted RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 MRPL28Q13084 256 aaKnown RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 TFDP2Q14188 446 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 TGFBIQ15582 683 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 ECM1Q16610 540 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 NECAB2Q7Z6G3 386 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 DHFR2Q86XF0 187 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 FEZF2Q8TBJ5 459 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 UCKL1Q9NWZ5 548 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 DIP2AQ14689 1571 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 CLDN25C9JDP6 229 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 H0Y858 1186 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 PROSCO94903 275 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 HSMCR30P0CW71 290 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 ATP6V1B2P21281 511 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 RFX1P22670 979 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 ACOT2P49753 483 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 STX5Q13190 355 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 SNRNP35Q16560 246 aaKnown RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 C6orf10Q5SRN2 563 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 C7orf31Q8N865 590 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 TAS1R2Q8TE23 839 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 CDHR1Q96JP9 859 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 C17orf80Q9BSJ5 609 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 UBR1Q8IWV7 1749 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 A0A1W2PQ72 361 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 TCRBV9S1A1TA0A576 114 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 A8MV72 311 aaPredicted RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 PSTPIP1O43586 416 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 RGS20O76081 388 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 TFDP3Q5H9I0 405 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 WDR45BQ5MNZ6 344 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 CRTC3Q6UUV7 619 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 ZBTB33Q86T24 672 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 NLRX1Q86UT6 975 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 SNX29P2Q8IUI4 249 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 EMC1Q8N766 993 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 Q8N9G6 341 aaPredicted RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 EPS8L1Q8TE68 723 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 RNF34Q969K3 372 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 PRICKLE1Q96MT3 831 aaPredicted RBP12.08□□□□□ -0.48
PTPN1-201ENST00000371621 VTA1Q9NP79 307 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 SUN2Q9UH99 717 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 LGALS13Q9UHV8 139 aa12.08□□□□□ -0.48
PTPN1-201ENST00000371621 ZNF804BA4D1E1 1349 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 LOC100506127A0A0U1RQW1 187 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 TCRBV5S4A2TA0A5A2 114 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 NRP2O60462 931 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 FOSP01100 380 aaPredicted RBP12.07□□□□□ -0.48
PTPN1-201ENST00000371621 SERPINE1P05121 402 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 RPL10P27635 214 aaKnown RBP12.07□□□□□ -0.48
PTPN1-201ENST00000371621 PTGS2P35354 604 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 CYP51A1Q16850 503 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 HEATR6Q6AI08 1181 aaKnown RBP12.07□□□□□ -0.48
PTPN1-201ENST00000371621 AHI1Q8N157 1196 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 SNX31Q8N9S9 440 aa12.07□□□□□ -0.48
PTPN1-201ENST00000371621 TNFRSF25Q93038 417 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms