RNA–Protein interactions for RNA: ENST00000371209.5

TCTN3-202, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 1,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-202ENST00000371209 NACA2Q9H009 215 aa10.89□□□□□ -0.67
TCTN3-202ENST00000371209 SMG9Q9H0W8 520 aaKnown RBP10.89□□□□□ -0.67
TCTN3-202ENST00000371209 POMKQ9H5K3 350 aa10.89□□□□□ -0.67
TCTN3-202ENST00000371209 TMPRSS4Q9NRS4 437 aa10.89□□□□□ -0.67
TCTN3-202ENST00000371209 GKN1Q9NS71 199 aa10.89□□□□□ -0.67
TCTN3-202ENST00000371209 SMPD4Q9NXE4 827 aa10.89□□□□□ -0.67
TCTN3-202ENST00000371209 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.89□□□□□ -0.67
TCTN3-202ENST00000371209 LCMT1Q9UIC8 334 aa10.89□□□□□ -0.67
TCTN3-202ENST00000371209 CD207Q9UJ71 328 aa10.89□□□□□ -0.67
TCTN3-202ENST00000371209 USP15Q9Y4E8 981 aaPredicted RBP10.89□□□□□ -0.67
TCTN3-202ENST00000371209 SPOPO43791 374 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 RNF8O76064 485 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 IGLV3-27P01718 113 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 HMBSP08397 361 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 MBL2P11226 248 aaPredicted RBP10.88□□□□□ -0.67
TCTN3-202ENST00000371209 PFKLP17858 780 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 GBP1P32455 592 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 PCK1P35558 622 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 MTHFRP42898 656 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 MARCKSL1P49006 195 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 KCNQ1P51787 676 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 TBX4P57082 545 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 GNG11P61952 73 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 SLC7A9P82251 487 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 NNTQ13423 1086 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 ZC3H12AQ5D1E8 599 aaKnown RBP10.88□□□□□ -0.67
TCTN3-202ENST00000371209 CMTM8Q8IZV2 173 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 SYCE1Q8N0S2 351 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 CCDC185Q8N715 623 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 TRIM58Q8NG06 486 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 ADAMTS19Q8TE59 1207 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 KRT35Q92764 455 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 FGF13Q92913 245 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 RIPOR3Q96MK2 946 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 ALS2CR12Q96Q35 445 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 WDR24Q96S15 920 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 MAGEB5Q9BZ81 275 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 SLITRK6Q9H5Y7 841 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 PCSK1NQ9UHG2 260 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 PACSIN2Q9UNF0 486 aaPredicted RBP10.88□□□□□ -0.67
TCTN3-202ENST00000371209 CCL26Q9Y258 94 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 TLR6Q9Y2C9 796 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 HBS1LQ9Y450 684 aaKnown RBP10.88□□□□□ -0.67
TCTN3-202ENST00000371209 CPQQ9Y646 472 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 COL6A3P12111 3177 aa10.88□□□□□ -0.67
TCTN3-202ENST00000371209 SOBPA7XYQ1 873 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 PRAMEF12O95522 483 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 F9P00740 461 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 SLC1A1P43005 524 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 SSR1P43307 286 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 RING1Q06587 406 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 ATP13A4Q4VNC1 1196 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 MEI1Q5TIA1 1274 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 SCYL2Q6P3W7 929 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 PEX26Q7Z412 305 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 RIN3Q8TB24 985 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 USP13Q92995 863 aaPredicted RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 ACSF2Q96CM8 615 aaPredicted RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 MYADMQ96S97 322 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 ZWILCHQ9H900 591 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 BRWD1Q9NSI6 2320 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 GPATCH2LQ9NWQ4 482 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 XPO7Q9UIA9 1087 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 USP18Q9UMW8 372 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 ARHGAP26Q9UNA1 814 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 HELZP42694 1942 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 KCNU1A8MYU2 1149 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 ENC1O14682 589 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 SCAMP3O14828 347 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 DDX3YO15523 660 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 MBTPS2O43462 519 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 PRPSAP2O60256 369 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 GREM1O60565 184 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 STC2O76061 302 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 KLKB1P03952 638 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 IRF1P10914 325 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 DESP17661 470 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 CCR1P32246 355 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 CTNNA1P35221 906 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 ADRA1BP35368 520 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 GJC1P36383 396 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 ETF1P62495 437 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 COG7P83436 770 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 SMAD4Q13485 552 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 PPP2R5DQ14738 602 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 CA9Q16790 459 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 SMTNL2Q2TAL5 461 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 KCNT1Q5JUK3 1230 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 FAM78AQ5JUQ0 283 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 SND1Q7KZF4 910 aaKnown RBP eCLIP10.87□□□□□ -0.676e-10■■■□□ 14.6
TCTN3-202ENST00000371209 ARID3BQ8IVW6 561 aaPredicted RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 ZSCAN18Q8TBC5 510 aaPredicted RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 HLA-CQ95604 372 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 RNF34Q969K3 372 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 NTAN1Q96AB6 310 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 KCTD12Q96CX2 325 aaKnown RBP10.87□□□□□ -0.67
TCTN3-202ENST00000371209 RSPRY1Q96DX4 576 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 HES6Q96HZ4 224 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 NCAPGQ9BPX3 1015 aa10.87□□□□□ -0.67
TCTN3-202ENST00000371209 SNRNP25Q9BV90 132 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms