RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 AAASQ9NRG9 546 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 VTI1BQ9UEU0 232 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 C2CD2Q9Y426 696 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CASTOR2A6NHX0 329 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 C5orf58C9J3I9 102 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 KCNK1O00180 336 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 PPP1R11O60927 126 aaPredicted RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 FKBP9O95302 570 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ATP6V1G2O95670 118 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ACAT1P24752 427 aaKnown RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 PEX5P50542 639 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ACVR2BQ13705 512 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 VGLL4Q14135 290 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CRYMQ14894 314 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 PARP6Q2NL67 630 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 AADACL2Q6P093 401 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 FKBP9P1Q75LS8 142 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 DDX53Q86TM3 631 aaKnown RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ARRDC4Q8NCT1 418 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 RFWD2Q8NHY2 731 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 RIN3Q8TB24 985 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 MRPS31Q92665 395 aaKnown RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ACO2Q99798 780 aaKnown RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CDT1Q9H211 546 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 PRDM5Q9NQX1 630 aaPredicted RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 A0A096LPK6 155 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 AKR1A1P14550 325 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 MGAT1P26572 445 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CRABP2P29373 138 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CYP2C18P33260 490 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 PPIL2Q13356 520 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CSHL1Q14406 222 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 TLK2Q86UE8 772 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 KCNMB4Q86W47 210 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ALLCQ8N6M5 410 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 TDRD5Q8NAT2 981 aaKnown RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CYGBQ8WWM9 190 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 EDEM1Q92611 657 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 WNT8BQ93098 351 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ADGRE3Q9BY15 652 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 TEKT2Q9UIF3 430 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 APPL1Q9UKG1 709 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ALBP02768 609 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 LTFP02788 710 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 UBTFL6P0CB48 400 aaPredicted RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ITGALP20701 1170 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ADRA1DP25100 572 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 MARCKSL1P49006 195 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 IRX1P78414 480 aaPredicted RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ADRM1Q16186 407 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CACHD1Q5VU97 1274 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 YAF2Q8IY57 180 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 FAM162AQ96A26 154 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 BTBD10Q9BSF8 475 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 CLPBQ9H078 707 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 ST6GALNAC4Q9H4F1 302 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 TLR8Q9NR97 1041 aaKnown RBP12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 PCDHB5Q9Y5E4 795 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 SIGLEC1Q9BZZ2 1709 aa12.16□□□□□ -0.46
DEPDC1-201ENST00000370966 E9PBE3 544 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 KLHL41O60662 606 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 ZSCAN5DPP0CG00 497 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 SLC1A6P48664 564 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 PSEN2P49810 448 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 SCARA3Q6AZY7 606 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 ANKS3Q6ZW76 656 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 PATL1Q86TB9 770 aaKnown RBP12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 RASGEF1CQ8N431 466 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 KYQ8NBH2 561 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 SEPT8Q92599 483 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 ALG3Q92685 438 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 DTNBP1Q96EV8 351 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 OXNAD1Q96HP4 312 aaPredicted RBP12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 MAF1Q9H063 256 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 MMADHCQ9H3L0 296 aaPredicted RBP12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 UBP1Q9NZI7 540 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 NRCAMQ92823 1304 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 WDR27A2RRH5 827 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 RAMP2O60895 175 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 ALDH2P05091 517 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 RHOCP08134 193 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 SLURP2P0DP57 97 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 YBX3P16989 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 TFE3P19532 575 aaPredicted RBP12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 POU6F1Q14863 301 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 ZCWPW2Q504Y3 356 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 DDI1Q8WTU0 396 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 RNF157Q96PX1 679 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 C17orf80Q9BSJ5 609 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 ZNF556Q9HAH1 456 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 CYP4F12Q9HCS2 524 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 STARD13Q9Y3M8 1113 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 TIMM13Q9Y5L4 95 aaPredicted RBP12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 CNTNAP2Q9UHC6 1331 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 A0A0A0MRY4 1105 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 GOLGA8TH3BQL2 631 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 TMEM132BQ14DG7 1078 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 OR5B17Q8NGF7 314 aa12.15□□□□□ -0.46
DEPDC1-201ENST00000370966 INPP5DQ92835 1189 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms