RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 RMND1Q9NWS8 449 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 WSB2Q9NYS7 404 aaPredicted RBP13.75□□□□□ -0.21
RPF1-201ENST00000370654 ARMCX3Q9UH62 379 aaPredicted RBP13.75□□□□□ -0.21
RPF1-201ENST00000370654 STRIP2Q9ULQ0 834 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 GTF3C3Q9Y5Q9 886 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 CFAP47Q6ZTR5 3102 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 ASPMQ8IZT6 3477 aa13.75□□□□□ -0.21
RPF1-201ENST00000370654 CKAP5Q14008 2032 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 HYAL3O43820 417 aaPredicted RBP13.74□□□□□ -0.21
RPF1-201ENST00000370654 NDUFS2O75306 463 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 GJB3O75712 270 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 PROS1P07225 676 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 VDRP11473 427 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 NCAM1P13591 858 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 BRD2P25440 801 aaKnown RBP13.74□□□□□ -0.21
RPF1-201ENST00000370654 CD6P30203 668 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 HOXD12P35452 270 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 TPMTP51580 245 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 DAOAP59103 153 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 BNC1Q01954 994 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 TMEM270Q6UE05 265 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 LCLAT1Q6UWP7 414 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 UNQ6494/PRO21346Q6UXR6 183 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 ANKS1BQ7Z6G8 1248 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 RGL4Q8IZJ4 473 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 CEP76Q8TAP6 659 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 SLC35F5Q8WV83 523 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 KCTD13Q8WZ19 329 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 GPR174Q9BXC1 333 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 CIPCQ9C0C6 399 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 MUC22E2RYF6 1773 aaPredicted RBP13.74□□□□□ -0.21
RPF1-201ENST00000370654 SPEGQ15772 3267 aa13.74□□□□□ -0.21
RPF1-201ENST00000370654 PPP1R3GB7ZBB8 358 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 SLC6A4P31645 630 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 LRRC63Q05C16 580 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 PTPRNQ16849 979 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 TTI2Q6NXR4 508 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 RFWD3Q6PCD5 774 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 RRAGAQ7L523 313 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 METTL3Q86U44 580 aaKnown RBP13.73□□□□□ -0.21
RPF1-201ENST00000370654 ADIPOR2Q86V24 386 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 GATA6Q92908 595 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
RPF1-201ENST00000370654 ADAM33Q9BZ11 813 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 DNAI2Q9GZS0 605 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 MTG2Q9H4K7 406 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 IL21RQ9HBE5 538 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 HESX1Q9UBX0 185 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 STOML2Q9UJZ1 356 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 KLK13Q9UKR3 277 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 PCDHB4Q9Y5E5 795 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 NUMA1Q14980 2115 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 CEP295Q9C0D2 2601 aa13.73□□□□□ -0.21
RPF1-201ENST00000370654 UPK3BL1B0FP48 263 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 UPK3BL2E5RIL1 263 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 ZBTB24O43167 697 aaPredicted RBP13.72□□□□□ -0.21
RPF1-201ENST00000370654 SH3BP5O60239 455 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 CYBBP04839 570 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 FYNP06241 537 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 EPHX1P07099 455 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 DPP6P42658 865 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 ATXN3P54252 364 aaPredicted RBP13.72□□□□□ -0.21
RPF1-201ENST00000370654 SLC8A3P57103 927 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 SIM1P81133 766 aaPredicted RBP13.72□□□□□ -0.21
RPF1-201ENST00000370654 STARD3Q14849 445 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 PLEKHG6Q3KR16 790 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 MPPE1Q53F39 396 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 FAM133BQ5BKY9 247 aaKnown RBP13.72□□□□□ -0.21
RPF1-201ENST00000370654 DCAF12L1Q5VU92 463 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 NADSYN1Q6IA69 706 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 KLHL10Q6JEL2 608 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 FAM124AQ86V42 546 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 RNF139Q8WU17 664 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 DNASE2BQ8WZ79 361 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 SIPA1Q96FS4 1042 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 KREMEN1Q96MU8 473 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 TMEM245Q9H330 911 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 FAM124BQ9H5Z6 455 aaPredicted RBP13.72□□□□□ -0.21
RPF1-201ENST00000370654 ABCB8Q9NUT2 735 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 DNAAF2Q9NVR5 837 aaKnown RBP13.72□□□□□ -0.21
RPF1-201ENST00000370654 ZMIZ1Q9ULJ6 1067 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPF1-201ENST00000370654 HBS1LQ9Y450 684 aaKnown RBP13.72□□□□□ -0.21
RPF1-201ENST00000370654 AKAP13Q12802 2813 aa13.72□□□□□ -0.21
RPF1-201ENST00000370654 SYNCRIPO60506 623 aaKnown RBP13.71□□□□□ -0.21
RPF1-201ENST00000370654 OPHN1O60890 802 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 GADD45BO75293 160 aaPredicted RBP13.71□□□□□ -0.21
RPF1-201ENST00000370654 SMC2O95347 1197 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 IGLV3-27P01718 113 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 SETSIPP0DME0 302 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.21
RPF1-201ENST00000370654 CD70P32970 193 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 HARS2P49590 506 aaKnown RBP13.71□□□□□ -0.21
RPF1-201ENST00000370654 STX17P56962 302 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 GRIK2Q13002 908 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 CNGA2Q16280 664 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 ADGRF1Q5T601 910 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 MSANTD2Q6P1R3 559 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 SERPINA13PQ6UXR4 307 aa13.71□□□□□ -0.21
RPF1-201ENST00000370654 CHST9Q7L1S5 443 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms