RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 Q9H521 79 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 MRPL40Q9NQ50 206 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PRDM5Q9NQX1 630 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PDLIM7Q9NR12 457 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 BATF3Q9NR55 127 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TBC1D13Q9NVG8 400 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 RGS17Q9UGC6 210 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ANGPTL2Q9UKU9 493 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 MDM4O15151 490 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SNX2O60749 519 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TRPA1O75762 1119 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 BAG2O95816 211 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PDHA1P08559 390 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 USP17L7P0C7H9 530 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PGAM1P18669 254 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 CD52P31358 61 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SCNN1AP37088 669 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 CDKN2BP42772 138 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TUFMP49411 452 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PSEN1P49768 467 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SERPINB8P50452 374 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 RENBPP51606 427 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 POLE2P56282 527 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TBX4P57082 545 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 CDH17Q12864 832 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 DNAJC3Q13217 504 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF177Q13360 481 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 CRYMQ14894 314 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 NOMO2Q5JPE7 1267 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 RASIP1Q5U651 963 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM171A1Q5VUB5 890 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 MAMDC4Q6UXC1 1216 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM35AQ86V20 835 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 MIB1Q86YT6 1006 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SLCO2A1Q92959 643 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SH3GL2Q99962 352 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 EFHD1Q9BUP0 239 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ADAM33Q9BZ11 813 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ALG13Q9NP73 1137 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 NPHS2Q9NP85 383 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ETNK2Q9NVF9 386 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TMEM59LQ9UK28 342 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 VANGL2Q9ULK5 521 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 FARP1Q9Y4F1 1045 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 CDY1Q9Y6F8 540 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 IGKV6-21A0A0C4DH24 114 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC12A8A0AV02 714 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 E5RI56 91 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ALOX15BO15296 676 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ADCY6O43306 1168 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 H2AFYO75367 372 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 STAU1O95793 577 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 F2P00734 622 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 URODP06132 367 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ZSCAN5DPP0CG00 497 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 KITP10721 976 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 MYL2P10916 166 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 YBX3P16989 372 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SERPINB4P48594 390 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PPM1FP49593 454 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 EFEMP1Q12805 493 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ITGA7Q13683 1181 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 AUHQ13825 339 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TAS1R3Q7RTX0 852 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 IFNL1Q8IU54 200 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ATXN7L3BQ96GX2 97 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM111AQ96PZ2 611 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 HNRNPABQ99729 332 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TMEM109Q9BVC6 243 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 EIF2AQ9BY44 585 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 BCO2Q9BYV7 579 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PRKD2Q9BZL6 878 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TKTL2Q9H0I9 626 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 MUC3BQ9H195 1237 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PCDH18Q9HCL0 1135 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 GTSE1Q9NYZ3 720 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 DDX20Q9UHI6 824 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PHTF1Q9UMS5 762 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PMPCBO75439 489 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 KLHL2O95198 593 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 WARSP23381 471 aaKnown RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SSTR1P30872 391 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 LILRA4P59901 499 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 IFI35P80217 286 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SATB1Q01826 763 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SMARCB1Q12824 385 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 NOMO1Q15155 1222 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 PCSK7Q16549 785 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC39A12Q504Y0 691 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 SPANXN3Q5MJ09 141 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 CRELD2Q6UXH1 353 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 FRA10AC1Q70Z53 315 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 IFNLR1Q8IU57 520 aaPredicted RBP5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 MCRS1Q96EZ8 462 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 ASIC4Q96FT7 647 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 LRGUKQ96M69 825 aa5.47□□□□□ -1.53
SMNDC1-202ENST00000369603 TASP1Q9H6P5 420 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms