RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 LRRC27Q9C0I9 530 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 FAM153AQ9UHL3 310 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 FBXO10Q9UK96 956 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 DUSP12Q9UNI6 340 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 AKT3Q9Y243 479 aa7.15□□□□□ -1.27
CSDE1-204ENST00000369530 C2CD4DB7Z1M9 353 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PJA2O43164 708 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 LRRN2O75325 713 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 IGLV3-27P01718 113 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 HNRNPA1P09651 372 aaKnown RBP eCLIP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 GLULP15104 373 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 ATF2P15336 505 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 TKTP29401 623 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 MAGEA11P43364 429 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 EIF3BP55884 814 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PEX3P56589 373 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 NOP14P78316 857 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 DLG4P78352 724 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 HNRNPDQ14103 355 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 SCUBE1Q8IWY4 988 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 ARL10Q8N8L6 244 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PRSS33Q8NF86 280 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF558Q96NG5 402 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 CENPKQ9BS16 269 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 MTIF3Q9H2K0 278 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 GOLGA2P5Q9HBQ8 144 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 TTC7AQ9ULT0 858 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PIN4Q9Y237 131 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 N6AMT1Q9Y5N5 214 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 DENND3A2RUS2 1198 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 TBKBP1A7MCY6 615 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 SFI1A8K8P3 1242 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 HNRNPRO43390 633 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 KRT86O43790 486 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 UNC5CO95185 931 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PCK1P35558 622 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 HSD17B3P37058 310 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PGFP49763 221 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 GPR17Q13304 367 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 CPLX4Q7Z7G2 160 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 WDR49Q8IV35 697 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 ZBED8Q8IZ13 594 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 CRYBG2Q8N1P7 616 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 GUF1Q8N442 669 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 TTC39CQ8N584 583 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 TOP6BLQ8N6T0 577 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 UCMAQ8WVF2 138 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 NLRP7Q8WX94 980 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 ARNTL2Q8WYA1 636 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PHF7Q9BWX1 381 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PLA2G2FQ9BZM2 168 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 DCLRE1BQ9H816 532 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 SLC28A3Q9HAS3 691 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 CRTAC1Q9NQ79 661 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 ABCF3Q9NUQ8 709 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 OBP2AQ9NY56 170 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 RWDD2AQ9UIY3 292 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 NBEAQ8NFP9 2946 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 A8MUI8 341 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PRR33A8MZF0 331 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 SRGAP2O75044 1071 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 ZBED1O96006 694 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 FUT4P22083 530 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 HNRNPH3P31942 346 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 NDUFV1P49821 464 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 TUBA4AP68366 448 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 ARID5AQ03989 594 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 FAM47CQ5HY64 1035 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 FAM26FQ5R3K3 315 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 PEAR1Q5VY43 1037 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 CROCCP3Q8IVE0 287 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 NUP93Q8N1F7 819 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 C2orf15Q8WU43 125 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 GAB3Q8WWW8 586 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 TTYH3Q9C0H2 523 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 SMOC2Q9H3U7 446 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 FAM207AQ9NSI2 230 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 NMRK1Q9NWW6 199 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 DKK3Q9UBP4 350 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 NOD1Q9Y239 953 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 LUC7L2Q9Y383 392 aaKnown RBP7.14□□□□□ -1.27
CSDE1-204ENST00000369530 HYOU1Q9Y4L1 999 aa7.14□□□□□ -1.27
CSDE1-204ENST00000369530 LSM1O15116 133 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 NVLO15381 856 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 AKR1B10O60218 316 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 MTRF1O75570 445 aaKnown RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 NUDT17P0C025 328 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CXCL8P10145 99 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 PFKLP17858 780 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 GTF2H1P32780 548 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 HALP42357 657 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 PFKPQ01813 784 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 OTUD1Q5VV17 481 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-204ENST00000369530 BORAQ6PGQ7 559 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 WDR59Q6PJI9 974 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 Q6ZNB5 142 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF683Q8IZ20 524 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CASKIN2Q8WXE0 1202 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 LRRC45Q96CN5 670 aa7.13□□□□□ -1.27
CSDE1-204ENST00000369530 CNOT6LQ96LI5 555 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms