RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 RAB20Q9NX57 234 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 MARCH2Q9P0N8 246 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 THAP10Q9P2Z0 257 aaPredicted RBP10.84□□□□□ -0.67
CLRN3-201ENST00000368671 SUSD2Q9UGT4 822 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 STRIP2Q9ULQ0 834 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 SLC27A6Q9Y2P4 619 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 NEUROG3Q9Y4Z2 214 aa10.84□□□□□ -0.67
CLRN3-201ENST00000368671 FAM237AA0A1B0GTK4 181 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 TMEM8BA6NDV4 472 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 SYNCRIPO60506 623 aaKnown RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 EPB41P11171 864 aaKnown RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 NCAM1P13591 858 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 CD59P13987 128 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 PRKCHP24723 683 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 GTF2H1P32780 548 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 RDXP35241 583 aaKnown RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 TKTL1P51854 596 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 RAD23BP54727 409 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 SLC8A3P57103 927 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 ARID5AQ03989 594 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 ENPEPQ07075 957 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 ZNF234Q14588 700 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 GOLGA7BQ2TAP0 167 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 ZCWPW2Q504Y3 356 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 DCAF17Q5H9S7 520 aaPredicted RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 WDR45BQ5MNZ6 344 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 TCERG1LQ5VWI1 586 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 ARHGAP17Q68EM7 881 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 ANKS1BQ7Z6G8 1248 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 CHCHD4Q8N4Q1 142 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 TTC39CQ8N584 583 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 FBXL13Q8NEE6 735 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 DDI1Q8WTU0 396 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 SORCS1Q8WY21 1168 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 NDRG1Q92597 394 aaKnown RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 TOE1Q96GM8 510 aaKnown RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 ULBP1Q9BZM6 244 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 MKRN2Q9H000 416 aaKnown RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 ITM2CQ9NQX7 267 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 DNAAF2Q9NVR5 837 aaKnown RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 WSB2Q9NYS7 404 aaPredicted RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 USP36Q9P275 1121 aaKnown RBP10.83□□□□□ -0.68
CLRN3-201ENST00000368671 CLEC4EQ9ULY5 219 aa10.83□□□□□ -0.68
CLRN3-201ENST00000368671 SPTBN2O15020 2390 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 KCNJ18B7U540 433 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 TULP2O00295 520 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 NPC1O15118 1278 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 CETN3O15182 167 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 SH3BP5O60239 455 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 STX10O60499 249 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 TSPAN3O60637 253 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 ZBED1O96006 694 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 EPHX1P07099 455 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 ACADMP11310 421 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 GRIK2Q13002 908 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 EDRF1Q3B7T1 1238 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 RAB41Q5JT25 222 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 TMPRSS6Q8IU80 811 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 NAXDQ8IW45 347 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 SCUBE3Q8IX30 993 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 CPXM2Q8N436 756 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 ZCCHC9Q8N567 271 aaKnown RBP10.82□□□□□ -0.68
CLRN3-201ENST00000368671 ANKRD52Q8NB46 1076 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 PRCCQ92733 491 aaPredicted RBP10.82□□□□□ -0.68
CLRN3-201ENST00000368671 PLD4Q96BZ4 506 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 SIPA1Q96FS4 1042 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 PIWIL1Q96J94 861 aaKnown RBP10.82□□□□□ -0.68
CLRN3-201ENST00000368671 UBXN6Q9BZV1 441 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 LRRC4Q9HBW1 653 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 ELOVL2Q9NXB9 296 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 TSPAN16Q9UKR8 245 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 ZDHHC9Q9Y397 364 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 MSRB2Q9Y3D2 182 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 PCDHB9Q9Y5E1 797 aa10.82□□□□□ -0.68
CLRN3-201ENST00000368671 MUC22E2RYF6 1773 aaPredicted RBP10.81□□□□□ -0.68
CLRN3-201ENST00000368671 A0A1B0GTW7 788 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 SRRM3A6NNA2 597 aaPredicted RBP10.81□□□□□ -0.68
CLRN3-201ENST00000368671 H0Y626 953 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 ZNF202O95125 648 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 TRIM16O95361 564 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 HLA-EP13747 358 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 CD19P15391 556 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 TPMTP51580 245 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 ZNF132P52740 706 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 COPAP53621 1224 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 BCAT1P54687 386 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 PDE4CQ08493 712 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 SLC14A1Q13336 389 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 ENPP2Q13822 863 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 HNRNPDQ14103 355 aaKnown RBP10.81□□□□□ -0.68
CLRN3-201ENST00000368671 EIF4HQ15056 248 aaKnown RBP10.81□□□□□ -0.68
CLRN3-201ENST00000368671 TRIP6Q15654 476 aaKnown RBP10.81□□□□□ -0.68
CLRN3-201ENST00000368671 CBWD6Q4V339 395 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 MPPE1Q53F39 396 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 CBWD3Q5JTY5 395 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 CBWD5Q5RIA9 395 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 TMEM215Q68D42 235 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 SERPINA13PQ6UXR4 307 aa10.81□□□□□ -0.68
CLRN3-201ENST00000368671 FAM124AQ86V42 546 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms